| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0023 |
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| Symbol | |
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| ID | 8805752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 27493 |
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| End bp | 29112 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003459276 |
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| Protein GI | 289207210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.16107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACA ACGCACAAGA CCCGAAACGG GAGATCGAGG AGCTCGAGGC CCGTTACGAG
ACCGATCACG AGATCGGGGA ACAGAACATC AACCCGCTGG GACTGGATCT GCACAACCCG
GTATTCGCCG TCAGCGCCCT GCTGATCCTC GCGTTCGTGA TCCTGTCCCT GATGTTCCCG
GAACAGGCCG ACGAGGGCCT GGGCGCCACG CGTGCCTGGA TCGGCGAGAC CTTTGACTGG
CTGTTCTTGT CGGCCGGCAA CCTGTTCGTG CTGTTCTGTC TGGCCCTGAT CCTGCTGCCG
GTCGGGAGCA TCCGGATTGG CGGCCAGGAT GCGAAGCCGG ACTTCAGCGT GCTGTCCTGG
TTCTCGATGC TGTTCGCCGC CGGCATGGGC ATCGGCCTGA TGTTCTGGGC CGTGGCCGAA
CCGGTAGGCT ACTTCACCGA GTGGTTCGGG ACGCCCTTGG GCATCGAGGG CGGCACCGAG
GAAGCGAAGC ACGCGGCCCT GGGTGCGACG ATGTATCACT GGGGCCTGCA CCCATGGGCG
ATCTATGCCG TGGTAGGCCT GGCGCTGGCG TTCTTTGCCT TTAACAAGGG CCTGCCGCTG
ACCATTCGCT CCGCGTTCTA CCCGATCTTC GGCGAGCGGA TCTGGGGCCC GCTCGGGCAT
GTGATCGACA CCCTGGCGGT ACTGGCCACC CTGTTCGGCC TGGCCACCTC CCTGGGTCTT
GGGGCGCAGC AGGCGGCATC GGGGCTGGAG TCGGTGTTCG GCATCGAAGC CGGCCTGAAC
ACCCAGGTCG CGATCATCAT CGGCGTCACG GTAATTGCCC TGTTGTCGAT CATGCGCGGC
ATCCATGGCG GGGTGCGCGT GCTCAGCAAC ATCAACCTGA CGCTGGCGGT GGTACTGCTA
CTGTTCGTGG CCCTGTTCGG CGGCTTTATC GCCTTCCTCT CCAATACCGG CATCACGCTG
AGCGCCTACG CCCAGTACAT GTGGCCGCTC AGCAACCCTG TGGGTCGTGA CGACCAGACC
TTCTATCACG AGTGGACGAT CTTCTTCTGG GCCTGGTGGA TCTCCTGGTC GCCGTTTGTC
GGCATGTTCA TCGCACGGGT CTCGCGCGGG CGCACGGTAC GCCAGTTCGT GACCGCGGTG
CTGCTGGTGC CAACGGCCGT GACCGTGATC TGGATGAGTG CCTTTGGCGG GACCGGCCTG
GATCAGGCCC GCGACGGGGT CGGTGCACTG GCCGACGGCA TCAGTGACTC CTCGCTGGCG
CTGTTCCAGA TGCTCGAGCA CCTGCCGCTG ACCACGATCA CCTCACTGCT GGCAATCACC
CTGGTCCTGG TTTTCTTCAT CACCTCGTCA GACTCCGGCT CGCTGGTGAT CGACTCGATC
ACCTCCGGCG GCAAGACCGA CGCCCCGCAG TCCCAGCGCC TGTTCTGGGC CACGGTCGAG
GGCGTGATCG CCGGTGTGCT GCTGGCGGTG GGTGGCGCGG CCGCGCTGCA GGCCCTGCAG
GCCGGTGCCG TCAGCGCCGG CCTGCCCTTC GTGATCGTGC TGCTGTTCAT GTGCGTCAGC
CTGATGATGG GGCTGTTCCA CGAACTCAAG CTGATCCGAC TGAAGGAGGC GACCGGATAG
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| Protein sequence | MSDNAQDPKR EIEELEARYE TDHEIGEQNI NPLGLDLHNP VFAVSALLIL AFVILSLMFP
EQADEGLGAT RAWIGETFDW LFLSAGNLFV LFCLALILLP VGSIRIGGQD AKPDFSVLSW
FSMLFAAGMG IGLMFWAVAE PVGYFTEWFG TPLGIEGGTE EAKHAALGAT MYHWGLHPWA
IYAVVGLALA FFAFNKGLPL TIRSAFYPIF GERIWGPLGH VIDTLAVLAT LFGLATSLGL
GAQQAASGLE SVFGIEAGLN TQVAIIIGVT VIALLSIMRG IHGGVRVLSN INLTLAVVLL
LFVALFGGFI AFLSNTGITL SAYAQYMWPL SNPVGRDDQT FYHEWTIFFW AWWISWSPFV
GMFIARVSRG RTVRQFVTAV LLVPTAVTVI WMSAFGGTGL DQARDGVGAL ADGISDSSLA
LFQMLEHLPL TTITSLLAIT LVLVFFITSS DSGSLVIDSI TSGGKTDAPQ SQRLFWATVE
GVIAGVLLAV GGAAALQALQ AGAVSAGLPF VIVLLFMCVS LMMGLFHELK LIRLKEATG
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