| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0012 |
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| Symbol | |
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| ID | 8805741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 14006 |
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| End bp | 14953 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003459265 |
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| Protein GI | 289207199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.625024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCC TGCGTATCGC CACTCGAAAA AGCCCGCTCG CCATGTGGCA GGCGGAACAT
GTCGCCGCGC GCCTGCGGGG CCTGCACCCG GATCTTCCGG TGGAACTGGT CGGCATGACG
ACCCAGGGCG ATCGCGTGCT CGACTCCCCG CTGGCCCGTA TCGGCGGCAA GGGGCTGTTC
GTGAAGGAGC TGGAGGTCGC AATGCTGGAG GATCGTGCGG ACATCGCGGT CCATTCGGTC
AAGGACGTGC CCATGGAGCT GCCGGCGGAC CTGGTGCTAC CGGTGATCCT CGACCGGGAA
GATCCGCTGG ATGCGTTCGT CTCCAACACC TATGCCCATG TCGACGAGCT GCCCCAGGGC
GCGCGCGTGG GTTCGTCCAG CCTGCGCCGG CAGTGCCAGC TGCGGGCACG GCGGCCGGAC
CTGAAGATCA CCGATCTGCG CGGCAACGTG AACACCCGGC TGGGCAAGCT GGATGCCGGC
GAGTACGACG CGATCCTGCT GGCGGCGGCC GGGCTGAAGC GCCTTGGGTT CGACGAGCGC
ATCCGCGCCC GGCTGGAACC GGCTGTCAGC CTGCCGGCAG TGGGCCAGGG GGCAATCGCC
ATCGAGTGCC GCGAGAACGA CCCGGAGATC GCGGCGCTGA TCGCACCCCT GAACGACCGC
GACACCTCCG ACCGCGTGCG TGCAGAACGC GCGTTCAATC GCCGCCTGGA GGGCGGCTGC
CAGGTCCCTC TGGCCGGCCA CGCAACCCTG GACGGCGACC GGCTCCGCCT GGACGGTCTG
GTCGGCGCCG TCGATGGCAG CCAGCTCCTG CGACGGCAGG TGGAAGGGCC GCGCGGCGAC
GCGGAGGCCC TCGGGGTACA GCTGGCCGAA CAACTGCTGG AACTGGGGGC TGGCGAGCTG
CTGGCCGCCG CCCACGCCGA GAACGCAGCC TCCACGAAAG GATCCTGA
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| Protein sequence | MKPLRIATRK SPLAMWQAEH VAARLRGLHP DLPVELVGMT TQGDRVLDSP LARIGGKGLF
VKELEVAMLE DRADIAVHSV KDVPMELPAD LVLPVILDRE DPLDAFVSNT YAHVDELPQG
ARVGSSSLRR QCQLRARRPD LKITDLRGNV NTRLGKLDAG EYDAILLAAA GLKRLGFDER
IRARLEPAVS LPAVGQGAIA IECRENDPEI AALIAPLNDR DTSDRVRAER AFNRRLEGGC
QVPLAGHATL DGDRLRLDGL VGAVDGSQLL RRQVEGPRGD AEALGVQLAE QLLELGAGEL
LAAAHAENAA STKGS
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