Gene TK90_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_0004 
Symbol 
ID8805733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp4005 
End bp6437 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content62% 
IMG OID 
ProductDNA gyrase, B subunit 
Protein accessionYP_003459257 
Protein GI289207191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.311816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT CTGAACCGCT TGATCCCGAA ACCTACGATT CTTCCCAGAT CCGTGTCCTT 
AAGGGCCTGG ACGCCGTGCG CAAGCGCCCT GGCATGTACA TCGGGGATAC CGATGACGGG
ACCGGCCTCC ACCACATGGT GTTCGAGGTC GTCGATAACT CGATTGACGA GGCGCTTGCC
GGCCACTGCG ACACCATCGA GGTTACGATC CACGAAGACA ACGCGGTCTC CGTCTCGGAT
AACGGGCGCG GTATCCCGGT GGATATCCAC GAGGAAGAAG GCAAGTCCGC TGCGGAGGTG
ATCCTGACGG TCCTTCACGC CGGCGGTAAG TTCGATAACA ACTCCTACAA GGTATCCGGC
GGGCTTCACG GCGTTGGGGT GTCGGTCGTG AATGCCCTGT CCGAAGAGCT CCGACTGGAG
ATCCATCGAG CCGGCGAGCG CCACGAGCAG GTCTACCATC TCGGTGTGCC CGACGCCCCT
CTGGCGGTCG CAGGGTCCAC CGATCGAACT GGCACCAGGA TTTGGTTCCG ACCCAGTGAC
GAGATCTTCA CGGACATCGA ATTTCACTAC GAGATCCTCG CGAAGCGCCT GCGGGAACTC
TCGTTCCTGA ACTCCGGGGT CCGGATCACC CTGCGCGATC AGCGGGACAA TCGCGAAGAG
ACCTTCCTGT TCGAAGGCGG GATTCGCGCC TTTGTCGAGC ACCTGAACCA GAAGAAGACG
GCGCTGCATC CCACTGTGAT CTACGCGAAC CAGACCCGCG AGGATGATTA CGTCGTCGAG
GTTGCGCTGC AGTGGAATGA CTCCTATCAG GAGAACATCT TCTGCTACAC CAACAACATC
CCGCAGCGCG ATGGCGGCAC CCATATGGCC GGCTTTCGCG CGGCGCTCAC CCGGACGGTC
AATCAGTACC TGGAGAAAGA GGGGCTGATC AAGAAGGCCA AGGTCGCCAC CGCCGGCGAC
GACATGCGTG AAGGCCTGAC GGCCGTGCTG TCGGTCAAGG TACCGGACCC GAAGTTCTCG
TCCCAGACCA AGGACAAGCT GGTCTCCTCC GAGGTCAAGC CGATCGTCGA GAGTGTCTTG
TCCGATGCGC TAACCAACTT CCTGCTGGAG AACCCGCCCG AGGCCAAGGC GATTACCGAC
AAGGTCCTCG AGGCGGCGCG TGCCCGCGAG GCCGCGCGCA AGGCGCGCGA GGTGACGCGC
CGCAAGGGTG CGCTGGATAT CGCCGGCTTG CCGGGCAAGC TGGCCGATTG CCAGGAAAAG
GACCCGGCCC ATTCAGAGCT TTATCTGGTG GAGGGCGACT CCGCGGGTGG CTCTGCCAAA
CAGGGACGGG ACCGCCATTT CCAGGCGATC CTGCCGTTGA AGGGAAAGAT CCTTAACGTC
GAACGTGCCC GTTTTGATCG CATGCTCGGC TCCGCCGAGG TCGGTACCCT GATTACCGCG
CTGGGTTGCG GGATCGGGAA AGACGAATAC GATCCGGACA AGCTGCGCTA CCACCGCATC
ATCATCATGA CTGACGCGGA TGTGGACGGA TCACACATCC GAACCCTGCT GCTGACCTTC
TTCTTCCGTC AGATGCCCGA GCTGATTGAG CGTGGGCATG TCTACATTGC CCAGCCACCG
CTGTACAAGA TCAAGCGCGG TAAGCGCGAG CAGTATGTCC GTGACGAGGC CGAGATGGGC
GAAATCGTGG TCTCGCTTGC TTTGGACGGT GCCGCACTGC ATCCGGGTCC GGACGCCCCG
CCCGTCACGG GAGAGGCCTT CGAGGAACTG GTGAAGGGCT ACCAGAAGGC CGCCCGTGCG
GTGGAGCGGC TGGGCCGTCT GTACGACTCG CGCATCCTCT GGGCCATGCT CGAGGCCGAT
GCGATTCCCG AGCCGCGCAG CGTCACCAAC CCTGACGTTC AGGCCTGGTT CTCGCGCATC
CTGGAATCCA TCTCCAGCGA TCGCGCCGGT GCCACCCGCT ACAGCCTGGG TCCGGTCACC
AATGTCGACG GTCATGCCCA GCTGAGCCTG GATCGGCTCG AGCACGGCGC GGCGCTCTCC
CAATACATCA CCGACGACAC GCTCGCCTCG CGCGATTTCC AGACCATTCT CGACCTCTCC
GCCCGCCTGA ATGCCCTGCT GGAGTCTGGT GCCTACATCA AGCGTGGCGA ACGCGTCCAT
CGCATCCAGG GCTTTTCCGA GGCGATGGAA TGGCTGCTCC AGGAGGGCCG CCGGGGTCTG
GCCACCCAGC GCTACAAGGG CCTGGGCGAG ATGAATCCGG AGCAGCTCTG GGAAACGACG
ATGAATCCCG AAACCCGTCG CCTGCTGCAG GTCCGGGTCG AGGATGCGAT CCGGGCGGAC
GAAATCTTCA CCACCCTGAT GGGGGATCAG GTCGAACCGC GCCGAGACTT CATCGAGTCC
CGAGCTTTAA GCGCGGAGAA CGTAGACGTC TGA
 
Protein sequence
MSESEPLDPE TYDSSQIRVL KGLDAVRKRP GMYIGDTDDG TGLHHMVFEV VDNSIDEALA 
GHCDTIEVTI HEDNAVSVSD NGRGIPVDIH EEEGKSAAEV ILTVLHAGGK FDNNSYKVSG
GLHGVGVSVV NALSEELRLE IHRAGERHEQ VYHLGVPDAP LAVAGSTDRT GTRIWFRPSD
EIFTDIEFHY EILAKRLREL SFLNSGVRIT LRDQRDNREE TFLFEGGIRA FVEHLNQKKT
ALHPTVIYAN QTREDDYVVE VALQWNDSYQ ENIFCYTNNI PQRDGGTHMA GFRAALTRTV
NQYLEKEGLI KKAKVATAGD DMREGLTAVL SVKVPDPKFS SQTKDKLVSS EVKPIVESVL
SDALTNFLLE NPPEAKAITD KVLEAARARE AARKAREVTR RKGALDIAGL PGKLADCQEK
DPAHSELYLV EGDSAGGSAK QGRDRHFQAI LPLKGKILNV ERARFDRMLG SAEVGTLITA
LGCGIGKDEY DPDKLRYHRI IIMTDADVDG SHIRTLLLTF FFRQMPELIE RGHVYIAQPP
LYKIKRGKRE QYVRDEAEMG EIVVSLALDG AALHPGPDAP PVTGEAFEEL VKGYQKAARA
VERLGRLYDS RILWAMLEAD AIPEPRSVTN PDVQAWFSRI LESISSDRAG ATRYSLGPVT
NVDGHAQLSL DRLEHGAALS QYITDDTLAS RDFQTILDLS ARLNALLESG AYIKRGERVH
RIQGFSEAME WLLQEGRRGL ATQRYKGLGE MNPEQLWETT MNPETRRLLQ VRVEDAIRAD
EIFTTLMGDQ VEPRRDFIES RALSAENVDV