Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_0004 |
Symbol | |
ID | 8805733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 4005 |
End bp | 6437 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | DNA gyrase, B subunit |
Protein accession | YP_003459257 |
Protein GI | 289207191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.311816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAT CTGAACCGCT TGATCCCGAA ACCTACGATT CTTCCCAGAT CCGTGTCCTT AAGGGCCTGG ACGCCGTGCG CAAGCGCCCT GGCATGTACA TCGGGGATAC CGATGACGGG ACCGGCCTCC ACCACATGGT GTTCGAGGTC GTCGATAACT CGATTGACGA GGCGCTTGCC GGCCACTGCG ACACCATCGA GGTTACGATC CACGAAGACA ACGCGGTCTC CGTCTCGGAT AACGGGCGCG GTATCCCGGT GGATATCCAC GAGGAAGAAG GCAAGTCCGC TGCGGAGGTG ATCCTGACGG TCCTTCACGC CGGCGGTAAG TTCGATAACA ACTCCTACAA GGTATCCGGC GGGCTTCACG GCGTTGGGGT GTCGGTCGTG AATGCCCTGT CCGAAGAGCT CCGACTGGAG ATCCATCGAG CCGGCGAGCG CCACGAGCAG GTCTACCATC TCGGTGTGCC CGACGCCCCT CTGGCGGTCG CAGGGTCCAC CGATCGAACT GGCACCAGGA TTTGGTTCCG ACCCAGTGAC GAGATCTTCA CGGACATCGA ATTTCACTAC GAGATCCTCG CGAAGCGCCT GCGGGAACTC TCGTTCCTGA ACTCCGGGGT CCGGATCACC CTGCGCGATC AGCGGGACAA TCGCGAAGAG ACCTTCCTGT TCGAAGGCGG GATTCGCGCC TTTGTCGAGC ACCTGAACCA GAAGAAGACG GCGCTGCATC CCACTGTGAT CTACGCGAAC CAGACCCGCG AGGATGATTA CGTCGTCGAG GTTGCGCTGC AGTGGAATGA CTCCTATCAG GAGAACATCT TCTGCTACAC CAACAACATC CCGCAGCGCG ATGGCGGCAC CCATATGGCC GGCTTTCGCG CGGCGCTCAC CCGGACGGTC AATCAGTACC TGGAGAAAGA GGGGCTGATC AAGAAGGCCA AGGTCGCCAC CGCCGGCGAC GACATGCGTG AAGGCCTGAC GGCCGTGCTG TCGGTCAAGG TACCGGACCC GAAGTTCTCG TCCCAGACCA AGGACAAGCT GGTCTCCTCC GAGGTCAAGC CGATCGTCGA GAGTGTCTTG TCCGATGCGC TAACCAACTT CCTGCTGGAG AACCCGCCCG AGGCCAAGGC GATTACCGAC AAGGTCCTCG AGGCGGCGCG TGCCCGCGAG GCCGCGCGCA AGGCGCGCGA GGTGACGCGC CGCAAGGGTG CGCTGGATAT CGCCGGCTTG CCGGGCAAGC TGGCCGATTG CCAGGAAAAG GACCCGGCCC ATTCAGAGCT TTATCTGGTG GAGGGCGACT CCGCGGGTGG CTCTGCCAAA CAGGGACGGG ACCGCCATTT CCAGGCGATC CTGCCGTTGA AGGGAAAGAT CCTTAACGTC GAACGTGCCC GTTTTGATCG CATGCTCGGC TCCGCCGAGG TCGGTACCCT GATTACCGCG CTGGGTTGCG GGATCGGGAA AGACGAATAC GATCCGGACA AGCTGCGCTA CCACCGCATC ATCATCATGA CTGACGCGGA TGTGGACGGA TCACACATCC GAACCCTGCT GCTGACCTTC TTCTTCCGTC AGATGCCCGA GCTGATTGAG CGTGGGCATG TCTACATTGC CCAGCCACCG CTGTACAAGA TCAAGCGCGG TAAGCGCGAG CAGTATGTCC GTGACGAGGC CGAGATGGGC GAAATCGTGG TCTCGCTTGC TTTGGACGGT GCCGCACTGC ATCCGGGTCC GGACGCCCCG CCCGTCACGG GAGAGGCCTT CGAGGAACTG GTGAAGGGCT ACCAGAAGGC CGCCCGTGCG GTGGAGCGGC TGGGCCGTCT GTACGACTCG CGCATCCTCT GGGCCATGCT CGAGGCCGAT GCGATTCCCG AGCCGCGCAG CGTCACCAAC CCTGACGTTC AGGCCTGGTT CTCGCGCATC CTGGAATCCA TCTCCAGCGA TCGCGCCGGT GCCACCCGCT ACAGCCTGGG TCCGGTCACC AATGTCGACG GTCATGCCCA GCTGAGCCTG GATCGGCTCG AGCACGGCGC GGCGCTCTCC CAATACATCA CCGACGACAC GCTCGCCTCG CGCGATTTCC AGACCATTCT CGACCTCTCC GCCCGCCTGA ATGCCCTGCT GGAGTCTGGT GCCTACATCA AGCGTGGCGA ACGCGTCCAT CGCATCCAGG GCTTTTCCGA GGCGATGGAA TGGCTGCTCC AGGAGGGCCG CCGGGGTCTG GCCACCCAGC GCTACAAGGG CCTGGGCGAG ATGAATCCGG AGCAGCTCTG GGAAACGACG ATGAATCCCG AAACCCGTCG CCTGCTGCAG GTCCGGGTCG AGGATGCGAT CCGGGCGGAC GAAATCTTCA CCACCCTGAT GGGGGATCAG GTCGAACCGC GCCGAGACTT CATCGAGTCC CGAGCTTTAA GCGCGGAGAA CGTAGACGTC TGA
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Protein sequence | MSESEPLDPE TYDSSQIRVL KGLDAVRKRP GMYIGDTDDG TGLHHMVFEV VDNSIDEALA GHCDTIEVTI HEDNAVSVSD NGRGIPVDIH EEEGKSAAEV ILTVLHAGGK FDNNSYKVSG GLHGVGVSVV NALSEELRLE IHRAGERHEQ VYHLGVPDAP LAVAGSTDRT GTRIWFRPSD EIFTDIEFHY EILAKRLREL SFLNSGVRIT LRDQRDNREE TFLFEGGIRA FVEHLNQKKT ALHPTVIYAN QTREDDYVVE VALQWNDSYQ ENIFCYTNNI PQRDGGTHMA GFRAALTRTV NQYLEKEGLI KKAKVATAGD DMREGLTAVL SVKVPDPKFS SQTKDKLVSS EVKPIVESVL SDALTNFLLE NPPEAKAITD KVLEAARARE AARKAREVTR RKGALDIAGL PGKLADCQEK DPAHSELYLV EGDSAGGSAK QGRDRHFQAI LPLKGKILNV ERARFDRMLG SAEVGTLITA LGCGIGKDEY DPDKLRYHRI IIMTDADVDG SHIRTLLLTF FFRQMPELIE RGHVYIAQPP LYKIKRGKRE QYVRDEAEMG EIVVSLALDG AALHPGPDAP PVTGEAFEEL VKGYQKAARA VERLGRLYDS RILWAMLEAD AIPEPRSVTN PDVQAWFSRI LESISSDRAG ATRYSLGPVT NVDGHAQLSL DRLEHGAALS QYITDDTLAS RDFQTILDLS ARLNALLESG AYIKRGERVH RIQGFSEAME WLLQEGRRGL ATQRYKGLGE MNPEQLWETT MNPETRRLLQ VRVEDAIRAD EIFTTLMGDQ VEPRRDFIES RALSAENVDV
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