Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2202 |
Symbol | |
ID | 2739478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2238774 |
End bp | 2239664 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637161092 |
Product | membrane protein |
Protein accession | NP_972803 |
Protein GI | 42527705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00337301 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATA AAATAAAATC ATATTTATCC GCTATTACTG CAATTGTTTT TTTTGGTTCC TCTTTTCCGT TTTCAAGATT TGCTTTAACA CATTTCGGGC CTGAAGCCTT GGGCTTTTTA AGATGCTTTT TGGCAAGTCT TGTTCTTTTA ATTATGGGAA GGTTTAATAA AATTAGAGCT CCCTTTAAAC TTAAACACAT AGGATTATTC TTTTTGTCGG GAGCGCTAGG TTTTGCCCTA TATCTTATCT TTTTTAATAT GGGCATTAGA ACAATCACAG CTGCAACCTC AAGCATCATA ATCGCTACTA CTCCCATAAT GACCGCTGCA GCAGCTTCCG TTATTTACAG TGAAAAAATA AGCAATGCAG GCTGGTTCTC TATTTTGACG GCTTTTTGCG GAGTTTTAGT TATTATTTTA TGGAAGGGAA TTTTATCGGT AAACATAGGC ATTTTATGGA CTATGTCGGC AGCTATTTCC TTTTGCGGAT ACAATATTTT AAGCCGAAAA CTTGCAAAAA TGGGCTATAC TTCAATAGAA ATCGTAACCT ATAGTATGAT TTGTGCAGCT GCTATCTTGT CGCCATTTTG TATTGACGGC TATAAGGAAC TCTCTTCTGC CGGCTTTAAA TACATAGGAA GCCTTTTATA CTTAGGAATT TTTACAAGCG CCTTAGGCTA TTTTTTCTTT AATAAGGGAA TAGAAATTGC CGAAAAAACA AGCGATATTA CAAATTTTCT TTTTTTTAAC CCCTTGATTG CAAGTATTTT AAGCTATCTT GCCCTAGGCG AAACTTTCAA TACAGGAACT GCGATAGGAG GGACAATAAT CATAGCAAGC ATTATAGTAT TTGCCCTAAA AGGTGAACAA AAGAAAGCTG CCGATAAATA A
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Protein sequence | MSNKIKSYLS AITAIVFFGS SFPFSRFALT HFGPEALGFL RCFLASLVLL IMGRFNKIRA PFKLKHIGLF FLSGALGFAL YLIFFNMGIR TITAATSSII IATTPIMTAA AASVIYSEKI SNAGWFSILT AFCGVLVIIL WKGILSVNIG ILWTMSAAIS FCGYNILSRK LAKMGYTSIE IVTYSMICAA AILSPFCIDG YKELSSAGFK YIGSLLYLGI FTSALGYFFF NKGIEIAEKT SDITNFLFFN PLIASILSYL ALGETFNTGT AIGGTIIIAS IIVFALKGEQ KKAADK
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