Gene Synpcc7942_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0489 
Symbol 
ID3774727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp475665 
End bp477044 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content57% 
IMG OID637798896 
Productaldehyde dehydrogenase 
Protein accessionYP_399508 
Protein GI81299300 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0498787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG TCGTTCTCCC TGCTGCCGCT GAAACGCTGG CTGCTTTACA AGCAACCTTT 
GATCGGGGGG ATACACGCAC GCTCGCCTTC CGACTGGCGC GATTACAGGA TCTGGCCAAG
CTAGTTGCTG ACAATGAAGC GGAGCTATTG CAAGCCTTGG CGTCAGACCT CCGCAAACCA
GCACTGGAAG CCTACGCCAG TGAGATTTAT TTCGTGCGCG ACCAAATCAA ACTGACCTGC
AAGCATCTGC GGCGCTGGAT GCAACCCGAG AAGCAGTCGA TTTCCTTGAT GCAGCAGCCT
GGCCAGGCCT ATCGCCAAGC AGAACCGCTC GGAGTCGTGC TGATCATTGG CCCCTGGAAC
TATCCCTTTC AGCTGCTCAT CACGCCGTTG ATTGGGGCGA TCGCGGCGGG AAATTGTGCC
GTACTCAAAC CATCGGAACT GGCTCCCGCG ACTTCCAGCC TGATTCAGCG ACTGATCAGC
GATCGCTTTG ACCCTGATTA CATCCGCGTT TTAGAAGGCG ATGCTAGCGT TAGCCAAGCC
CTGATTACTC AGCCCTTCGA TCACATCTTC TTCACTGGCG GCACGGCGAT CGGGCGAAAA
GTGATGGCTG CTGCGGCCGA AAACCTGACG CCCGTCACCC TCGAGTTGGG CGGTAAGTCA
CCCTGCATTG TTGATACCGA TATCGACCTC GATGTGGCCG CCCGTCGCAT CGCCTGGGGC
AAATTCTTCA ACGCCGGTCA AACCTGCATT GCGCCTGACT ATTTGTTGGT GCAACGCACG
GTCGCAGAGC CGTTCATTGA AGCGCTGATC GACAACATCC AGCAGTTCTA TGGCGAGGAT
CCGCAACAGA GTGCTGACTA CGCCCGCATT GTCAGCGATC GCCACTGGCA AAGGCTAAAT
AGCCTGTTGG TTGATGGCAC GATTCGCCAT GGTGGTCAGG TGGATAGGAG CGATCGCTAC
ATCGCACCGA CTTTAATTAC GGACGTCAAC TGGCGCGATC CCATCCTGCA AGAGGAGATT
TTTGGGCCCC TCTTGCCGAT TTTGATTTAC GACCAATTGG ATGAGGCGAT CGCCCAAATT
CGTGCCCAGC CCAAGCCCCT CGCGCTCTAT CTATTCAGCC GCGATCGCCA AGTGCAAGAG
CGCGTCCTAG CGGAAACCAG CGCCGGTAGC GTCTGCCTCA ACGACACGAT CCTGCAGGTC
GGCGTCCCCG ATGCTGCTTT TGGTGGGGTC GGCCCCAGCG GCATGGGCGG CTATCACGGC
AAAGCCAGTT TCGAAACCTT CAGTCACTAC AAGCTGGTGC TCAAGCGACC GTTTTGGCTC
GATCTGGCCC TGCGCTATCC GCCCTACGGC GACAAGATCA ACCTCTTCCG CAAGCTCTAG
 
Protein sequence
MTAVVLPAAA ETLAALQATF DRGDTRTLAF RLARLQDLAK LVADNEAELL QALASDLRKP 
ALEAYASEIY FVRDQIKLTC KHLRRWMQPE KQSISLMQQP GQAYRQAEPL GVVLIIGPWN
YPFQLLITPL IGAIAAGNCA VLKPSELAPA TSSLIQRLIS DRFDPDYIRV LEGDASVSQA
LITQPFDHIF FTGGTAIGRK VMAAAAENLT PVTLELGGKS PCIVDTDIDL DVAARRIAWG
KFFNAGQTCI APDYLLVQRT VAEPFIEALI DNIQQFYGED PQQSADYARI VSDRHWQRLN
SLLVDGTIRH GGQVDRSDRY IAPTLITDVN WRDPILQEEI FGPLLPILIY DQLDEAIAQI
RAQPKPLALY LFSRDRQVQE RVLAETSAGS VCLNDTILQV GVPDAAFGGV GPSGMGGYHG
KASFETFSHY KLVLKRPFWL DLALRYPPYG DKINLFRKL