Gene Synpcc7942_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0088 
Symbol 
ID3773428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp86547 
End bp87269 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content58% 
IMG OID637798494 
Producthypothetical protein 
Protein accessionYP_399107 
Protein GI81298899 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.45541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGAT CGCAACAGTT CCCTTCCTCA ACCGCTGTGT CTGTTTCGCC GCCTGCTGCC 
TCCTCGATCG CCAAGCCTCC CCAGCCTGTT TTGGATGGTC TGTGGGCGTT TGCGCCCAAC
CGCGACACCC TAGGGGGGAC AGCCTACTTC CTGAAATTGC CCCAGGGCAA CTGGTTGATT
GATGCACCGG CTTGGCATGG CGAAACCCAG GCTTTTGTCG AGGAGCAAGG TGGTTTGCAA
GGGGTCTTTC TGACCCATCG CGGGGCTTTT GGTAAAGCGA TCGCCATTCA GCAACACTTT
GACTGCGACT TGGTGGTGCA AGAGCAGGAA GCCTACCTAT TGCCCGGCGC AAACGTCACA
ACCTTTGAAC AGGAACAGGC GATCGCTCCA GCCTTAACTG CTATTTGGAC TTGTGGCCAC
AGTCCGGGTT CCGCTTGCCT GTATTGGGAG GGGCACGGTG GTGTTCTCTT TACAGGTCGC
CATTTGCTGC CAACTCGCGC AGGGGGGGTT GCCCCACTTC GCACCGCCAA GACCTTTCAC
TGGCCGCGTC AAATCCGTAA TACTCAAATG CTTTGCGATC GCTTCAGCTC TGAAACCTTG
GCTTGGATCT GCCCTGGTGC TAGCAGTGGC TTTTTGCGCG GCCGCAAAGC AATCGCCTCG
GCCTACATGC AGCTGCAACA GCTGGACTGG TCTGCGCTAT CGGAAGCTCA GCCGCTCCTC
TAG
 
Protein sequence
MARSQQFPSS TAVSVSPPAA SSIAKPPQPV LDGLWAFAPN RDTLGGTAYF LKLPQGNWLI 
DAPAWHGETQ AFVEEQGGLQ GVFLTHRGAF GKAIAIQQHF DCDLVVQEQE AYLLPGANVT
TFEQEQAIAP ALTAIWTCGH SPGSACLYWE GHGGVLFTGR HLLPTRAGGV APLRTAKTFH
WPRQIRNTQM LCDRFSSETL AWICPGASSG FLRGRKAIAS AYMQLQQLDW SALSEAQPLL