Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0088 |
Symbol | |
ID | 3773428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 86547 |
End bp | 87269 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798494 |
Product | hypothetical protein |
Protein accession | YP_399107 |
Protein GI | 81298899 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.45541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGAT CGCAACAGTT CCCTTCCTCA ACCGCTGTGT CTGTTTCGCC GCCTGCTGCC TCCTCGATCG CCAAGCCTCC CCAGCCTGTT TTGGATGGTC TGTGGGCGTT TGCGCCCAAC CGCGACACCC TAGGGGGGAC AGCCTACTTC CTGAAATTGC CCCAGGGCAA CTGGTTGATT GATGCACCGG CTTGGCATGG CGAAACCCAG GCTTTTGTCG AGGAGCAAGG TGGTTTGCAA GGGGTCTTTC TGACCCATCG CGGGGCTTTT GGTAAAGCGA TCGCCATTCA GCAACACTTT GACTGCGACT TGGTGGTGCA AGAGCAGGAA GCCTACCTAT TGCCCGGCGC AAACGTCACA ACCTTTGAAC AGGAACAGGC GATCGCTCCA GCCTTAACTG CTATTTGGAC TTGTGGCCAC AGTCCGGGTT CCGCTTGCCT GTATTGGGAG GGGCACGGTG GTGTTCTCTT TACAGGTCGC CATTTGCTGC CAACTCGCGC AGGGGGGGTT GCCCCACTTC GCACCGCCAA GACCTTTCAC TGGCCGCGTC AAATCCGTAA TACTCAAATG CTTTGCGATC GCTTCAGCTC TGAAACCTTG GCTTGGATCT GCCCTGGTGC TAGCAGTGGC TTTTTGCGCG GCCGCAAAGC AATCGCCTCG GCCTACATGC AGCTGCAACA GCTGGACTGG TCTGCGCTAT CGGAAGCTCA GCCGCTCCTC TAG
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Protein sequence | MARSQQFPSS TAVSVSPPAA SSIAKPPQPV LDGLWAFAPN RDTLGGTAYF LKLPQGNWLI DAPAWHGETQ AFVEEQGGLQ GVFLTHRGAF GKAIAIQQHF DCDLVVQEQE AYLLPGANVT TFEQEQAIAP ALTAIWTCGH SPGSACLYWE GHGGVLFTGR HLLPTRAGGV APLRTAKTFH WPRQIRNTQM LCDRFSSETL AWICPGASSG FLRGRKAIAS AYMQLQQLDW SALSEAQPLL
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