Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0084 |
Symbol | |
ID | 3773801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 81217 |
End bp | 81918 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798490 |
Product | hypothetical protein |
Protein accession | YP_399103 |
Protein GI | 81298895 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.956959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAC TGGGCTTGAG TCTGACGGCG ATCGCGATTT TTACCACGAC GGCATTAGCT TTGGTGGGAC CAATGCTGGG TAGTTCTCCG CTGCTACCGG CGGGATTGGG TTTTAGCCTC TTGGTGCTGT TCAGTCTGGA TGCGGTGACT TGGCAGGGGC GGGGTGCCAC GTTACTGCTC GATGGCATTC AGCAGCGATC GCCCGAATAT CGTCAGCGGA TTTTGCATCA CGAAGCGGGT CACTACTTGG TAGCAACCGC GCTGGGGTTA CCCGTGACGG GCTACACCCT CTCAGCGTGG GAAGCGCTGC GCCAAGGACA ACCTGGTCGC GGGGGTGTGC AGTTCCAAGC AGCTGCGCTA GAAGCCGAAG CCGCACAGGG GCAACTCAGT CAGCGATCGC TGGAACAGTG GTGTCAGGTG TTGATGGCCG GTGCAGCGGC AGAGCAACTG GTCTACGGCA ACGTGGAAGG GGGAGCTGAC GATCGCGCCC AGTGGAAACA ACTGTGGCGG CAACTCGATC GCAATCCTGC CGAAGCGGAT TTACGCAGTC GCTGGGGATT GTTACGGGCG AAGACTTTAC TGGAGCAACA ACGTCCCGCC TACGATGCTT TGGTGGCGGC GATGGCTGCA GAGGCCAGCA TTGAAGACTG CAATCAAGCG ATCGCCACTG CTTGGGTAGA AGAACCTGCG ATCGCCGCTT AG
|
Protein sequence | MSELGLSLTA IAIFTTTALA LVGPMLGSSP LLPAGLGFSL LVLFSLDAVT WQGRGATLLL DGIQQRSPEY RQRILHHEAG HYLVATALGL PVTGYTLSAW EALRQGQPGR GGVQFQAAAL EAEAAQGQLS QRSLEQWCQV LMAGAAAEQL VYGNVEGGAD DRAQWKQLWR QLDRNPAEAD LRSRWGLLRA KTLLEQQRPA YDALVAAMAA EASIEDCNQA IATAWVEEPA IAA
|
| |