Gene Synpcc7942_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0084 
Symbol 
ID3773801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp81217 
End bp81918 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID637798490 
Producthypothetical protein 
Protein accessionYP_399103 
Protein GI81298895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.956959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGGGCTTGAG TCTGACGGCG ATCGCGATTT TTACCACGAC GGCATTAGCT 
TTGGTGGGAC CAATGCTGGG TAGTTCTCCG CTGCTACCGG CGGGATTGGG TTTTAGCCTC
TTGGTGCTGT TCAGTCTGGA TGCGGTGACT TGGCAGGGGC GGGGTGCCAC GTTACTGCTC
GATGGCATTC AGCAGCGATC GCCCGAATAT CGTCAGCGGA TTTTGCATCA CGAAGCGGGT
CACTACTTGG TAGCAACCGC GCTGGGGTTA CCCGTGACGG GCTACACCCT CTCAGCGTGG
GAAGCGCTGC GCCAAGGACA ACCTGGTCGC GGGGGTGTGC AGTTCCAAGC AGCTGCGCTA
GAAGCCGAAG CCGCACAGGG GCAACTCAGT CAGCGATCGC TGGAACAGTG GTGTCAGGTG
TTGATGGCCG GTGCAGCGGC AGAGCAACTG GTCTACGGCA ACGTGGAAGG GGGAGCTGAC
GATCGCGCCC AGTGGAAACA ACTGTGGCGG CAACTCGATC GCAATCCTGC CGAAGCGGAT
TTACGCAGTC GCTGGGGATT GTTACGGGCG AAGACTTTAC TGGAGCAACA ACGTCCCGCC
TACGATGCTT TGGTGGCGGC GATGGCTGCA GAGGCCAGCA TTGAAGACTG CAATCAAGCG
ATCGCCACTG CTTGGGTAGA AGAACCTGCG ATCGCCGCTT AG
 
Protein sequence
MSELGLSLTA IAIFTTTALA LVGPMLGSSP LLPAGLGFSL LVLFSLDAVT WQGRGATLLL 
DGIQQRSPEY RQRILHHEAG HYLVATALGL PVTGYTLSAW EALRQGQPGR GGVQFQAAAL
EAEAAQGQLS QRSLEQWCQV LMAGAAAEQL VYGNVEGGAD DRAQWKQLWR QLDRNPAEAD
LRSRWGLLRA KTLLEQQRPA YDALVAAMAA EASIEDCNQA IATAWVEEPA IAA