Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0057 |
Symbol | |
ID | 3775770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 59072 |
End bp | 60304 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637798463 |
Product | putative C-3 methyl transferase |
Protein accession | YP_399076 |
Protein GI | 81298868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00760269 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCATT CCTGCCGCCA CTGTGGATCG CTCCTCCAGC AAGAGGTGAT CGATCTGGGG CACCAACCAC CCAGCAATGC TTACCTAACG GCAGAGCAGT TGTTGTTGCC CGAGCTGACC TATCCGCTCA AGGTCTATGT TTGTACGGAC TGTTGGCTTG TACAGTTACC GGCGCATGCG GCGGCTGAGG AACTCTTTAC AGCTGACTAT GCCTATTTTT CGAGTACGTC TGAGAGCTGG TGTGCCCATG CTCAGCGGTT TGTGGAGCAA GCAGTTGAGC AACTAGAGCT AGGACCCAAG AGTTTGGTAG TGGAGATAGC CAGTAATGAT GGCTACCTAC TGCAGTATGT GCAGCAGCGG GGGATTCCTT GCTTGGGTAT TGAACCAACG CAAGCAACTG CCAATGCTGC TCGCAATCGG GGGATTGAAA CGATTGAGCG CTTCTTTGGA ACAGCACTGG CCGAGGAACT CACTGCCGAA GGCGCTCCGG TGAGTGGCGG GGCCGATTTG GTAGTAGCTA ACAACGTCTT GGCGCATGTG CCCGACATTA ATGACTTTAT GGCGGGGATT GCAAAGCTGC TAAAACCTCA AGGCCGGGCT TCGCTGGAGT TTCCACACTT GCTGAGGCTG TTGGAAGGTA ATCAGTTTGA CACGATCTAT CACGAGCATT ACAGCTACCT AAGCCTAAAG GTTGTGCAGC AGATTGCTAA TCTTGTAGGC CTAGTGATTG CAGATGTAGA GCAGCTAGCA ACACATGGAG GGAGTTTACG AGTTTGGTTG GTCCATCAAG GAACCACAGA ACCCAGCAGA TCTGTTGAGG AATTACTGGC AATTGAGGCA ATAAGCCAGC TCGAGCAGAT TGAGACCTAT ACTGATTTTC AGAAGCGGGC AGAGGCTGCA AAAGACGATT TGTTAGGTTT TTTACTACAG GAAAAGCAAA ATGGAAAATT TGTTTTAGGC TATGGCGCTG CAGCTAAAGG AAATACCTTG CTGAACTATG CAGGAGTCAA AGTAGATTTA CTACCTGCTG TAGCGGATCG AGCGATGAGT AAGCAAGGAA AATTTCTACC AGGTAGCCAT ATTCCCGTCA TCAGTCCAGA GGAACTTATC AAACAACAGG TTGATTGGCT GTTGGTATTG CCATGGAATC TTGTTCATGA AATTAGAAAA CAGTTACCTG AATATCCATT GGTCACGGCA ATTCCTGAAT TAAAGACTTG GAGTTCTCAA TAA
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Protein sequence | MSHSCRHCGS LLQQEVIDLG HQPPSNAYLT AEQLLLPELT YPLKVYVCTD CWLVQLPAHA AAEELFTADY AYFSSTSESW CAHAQRFVEQ AVEQLELGPK SLVVEIASND GYLLQYVQQR GIPCLGIEPT QATANAARNR GIETIERFFG TALAEELTAE GAPVSGGADL VVANNVLAHV PDINDFMAGI AKLLKPQGRA SLEFPHLLRL LEGNQFDTIY HEHYSYLSLK VVQQIANLVG LVIADVEQLA THGGSLRVWL VHQGTTEPSR SVEELLAIEA ISQLEQIETY TDFQKRAEAA KDDLLGFLLQ EKQNGKFVLG YGAAAKGNTL LNYAGVKVDL LPAVADRAMS KQGKFLPGSH IPVISPEELI KQQVDWLLVL PWNLVHEIRK QLPEYPLVTA IPELKTWSSQ
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