Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0029 |
Symbol | |
ID | 3774249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 30012 |
End bp | 30833 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798434 |
Product | hypothetical protein |
Protein accession | YP_399048 |
Protein GI | 81298840 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.833519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGC TAACCCCCGC CAAAATTGGT CAGCAGTTTG GCGCTGCTGC CAGAACCTAT GAATCGGTGG CGATCGCCCA GAAAGTCGCT GTCGATCGCT TGAGTACCGC TTTTAGAGCT ATTGACTTGC CAGCGGGACC GATCCTTGAA ATCGGCTGTG GCACAGGCTT ACTCAGTCGA AAACTGCACC AGACTTGGCC CGATCGCTCC CTGATTTGCT CTGATCTTTC ACCGGCGATG CTGGCTGCCT GTGAGCAGAA TTTACCGCGA TCGCCTCAGC TCCAGTTTCA GGTTTTGGAT GGAGCGACCG TCCGCCCAGA ACCCGCCTAT GCCGCGATCG CCAGTAGTTT TGCCCTGCAA TGGCTGCCAG ATCCGCTAGC GAGTTTGCAG CGCTGGCAAG CGGCTTTAGT TCCGGGCGGC TGGCTCTTAC TAGCAGTGCC GACAGCAGGC AGTTTTCAGG TCTGGCGACA GCTCTGTGAG CAGTTGCAGA TTCCCTTTAC GGGACATCCA CTGCCGGAGG CAGCTGAGAT TCAGGCCGTC TTGTCGCGAT CGGGACAACT CCAGCAGGGA TCTTGCGATC GCCTGACGTT ACCGATCACC AACGCCCGCC ACTTTTTCCG GCAACTCAAA GACCTCGGAG CGACGGCAAC AGCGGCCGAT CCTCTGCCAC CCCAGCAATT TCGGCGCTTA CTCCAAGCTT GGGATCAGCG ATCGCAACCG ATTGAGCAAG AATTTTGGTG GGGGCTGTGG CAAAAATCGC CTGTACCTGC AGCGATCGCG CCGGTGAGCT GCCCTGATCC CCGTTGTTCT CTGCTGACTT AA
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Protein sequence | MSALTPAKIG QQFGAAARTY ESVAIAQKVA VDRLSTAFRA IDLPAGPILE IGCGTGLLSR KLHQTWPDRS LICSDLSPAM LAACEQNLPR SPQLQFQVLD GATVRPEPAY AAIASSFALQ WLPDPLASLQ RWQAALVPGG WLLLAVPTAG SFQVWRQLCE QLQIPFTGHP LPEAAEIQAV LSRSGQLQQG SCDRLTLPIT NARHFFRQLK DLGATATAAD PLPPQQFRRL LQAWDQRSQP IEQEFWWGLW QKSPVPAAIA PVSCPDPRCS LLT
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