Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0025 |
Symbol | |
ID | 3774245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 25416 |
End bp | 27122 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637798430 |
Product | hypothetical protein |
Protein accession | YP_399044 |
Protein GI | 81298836 |
COG category | [R] General function prediction only |
COG ID | [COG4188] Predicted dienelactone hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.797513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAA GCGACACGAC AAAATGGAAG CTAATCTCTG TCGCGGGTTT GAAGGTCTGT CCTGTGAAAC CACGGCACCA GCCGCCTCGC TACTTACGCC CTAGGGCTCG CATTCACTTT TGTCTGACGC GATTGCTGTG GAGCAGCGGC TTTGCTTTTG GCCTTTGGGG GGCGATCGCC CTGCCCAGTC GTCCGGCTGA AACCTTGCGG GTCTCTTGGG CGGATACCAA TCTTGATCTG CCCGTCTCAG TTCTCGAAAA CTTCCAGAGA ACTGGCCGCT TCGATCGCGG CTTTGGCTTT TTGAATGTGC TGGTTCCAGA AGCGACGTTG AAGGAGGCTC GCACTGCCCT GAGCGCAAGA CTGCCGCTAT CGCCAGAGGT GTTGCGGCCG GTGTTGACTA ACACCGACAC CCTCGAAATC TTTTTGCAGC AGATTGGCAG CTTGATTCGG CCCCAGCCCG GTGAGTCGGG TGCAGCGGCT CTGCGTCAGG CGCTGCTGAC GGCTAGCGAA CAGCCGCAGG GACTGACTTT GATTGGACTG ATCAAGGCCT TTCCTGGACC GCTCATGCAG CTGGACTTGG ATACTGGCCT CAAGCTGTTT CAGCGGATTC GGGCCTTAGA GGCGGAAACG GGTGCAATGC TGCGAGCGAT CGCAGCCCAA ATGCAAGAGC AACCCTCCCT GCCCAGCCGT AACTTCCGGC CTGCCCAGCG CGGCCCCTAC ACGGTACGGC AGCAAAACTG GGACTGGGTC GACAGCGATC GCACGCGTCG GGTACCTACC ACGATCTACT GGCCCGATCG CCAAGGGCTA TCCCTGCCAG TGGTCATCAT CTCCCATGGT TTGGGGGAAG ATCGTGGCAA CTTTGCCTAC CTAGCCCAGT TTTTGGCCAG TCATGGGTTT GTTGTTGTCC TGCCGGAACA TGTCGGCAGT TCCTCGCGCC AGTTTGCCTC GGCAGCGGCA GGTTTTGCCA ACCCCCCTGG CCCCCAAGAG GCGATCGATC GACCCCAAGA TATCCGCTTT GTGCTCGATC GCTTGATGCT GGAACCCCAG TGGCGCTTTC GTGTCAATAC CCGACGGGTG GCGGTGCTGG GGCATTCCTA CGGCGGTTTT ACAGCCTTGA TGCTGGCAGG AGCAGTGATT GAACCCGAGA AGATTCGTGC GGCTTGCAGC TCAGTCGAAC GGTTGATGCT TGTGCCTTCC GCATCGTTGC AGTGCAGTCT GGGGCGCTTA CCCCGCGATC GCTACGACCT GCGCGATCCG CGCGTGGTTG CTGTGTTGCC GATTAGCCCC TTTGCCAGCA AGGTGTTTGA GCCAGCTGCT CTCAACCAAG TGCAGACCCC CACCTTGCTC TGGAGTGGCA GTGCCGATTT GATCGTGCCG ACTTTGGCCG AGGCCATTCA ACCCTTTCAA CGGCTGGGCA GCCCCAACAA GCATCTGGTC GTTGCGGTGA ATGCCACCCA CTTTTCGGTG CTAGGTGAGA GTCAAGGGCC TGCGACTCGC CTACCACCTG CATTGCTGGG ACCCTCGCCA GAGTTGGGGC GACGAGCCTT GCAACAGGTC AGTCTCTCCT TTTTGCAGAC CTACCTGCTG GGCCAAAGCC AAGCCCGAGT TGGTTTGACT GCAGCGGCGG CGGAACAGCT GTCGAATCCG GTAATGCCCC TGCTGTTTAG TGAGCAGCTG CCGCCAGCGA TCGCCCGCCA GAACTGA
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Protein sequence | MHPSDTTKWK LISVAGLKVC PVKPRHQPPR YLRPRARIHF CLTRLLWSSG FAFGLWGAIA LPSRPAETLR VSWADTNLDL PVSVLENFQR TGRFDRGFGF LNVLVPEATL KEARTALSAR LPLSPEVLRP VLTNTDTLEI FLQQIGSLIR PQPGESGAAA LRQALLTASE QPQGLTLIGL IKAFPGPLMQ LDLDTGLKLF QRIRALEAET GAMLRAIAAQ MQEQPSLPSR NFRPAQRGPY TVRQQNWDWV DSDRTRRVPT TIYWPDRQGL SLPVVIISHG LGEDRGNFAY LAQFLASHGF VVVLPEHVGS SSRQFASAAA GFANPPGPQE AIDRPQDIRF VLDRLMLEPQ WRFRVNTRRV AVLGHSYGGF TALMLAGAVI EPEKIRAACS SVERLMLVPS ASLQCSLGRL PRDRYDLRDP RVVAVLPISP FASKVFEPAA LNQVQTPTLL WSGSADLIVP TLAEAIQPFQ RLGSPNKHLV VAVNATHFSV LGESQGPATR LPPALLGPSP ELGRRALQQV SLSFLQTYLL GQSQARVGLT AAAAEQLSNP VMPLLFSEQL PPAIARQN
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