| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0016 |
|---|
| Symbol | |
|---|
| ID | 3774236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 15020 |
|---|
| End bp | 15604 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637798421 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_399035 |
|---|
| Protein GI | 81298827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.936416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.447273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCG GTCTCAAGAT TTCACCGCAA CTCCGTCAAA AAATCGATCG CGAGCTGGAT
CTGCGTGAAA AAATTCTCTG GATTGGGCAA CCGGCGCCCA GTTTGATGAT TTTGACTGGT
GGGACCCTCG CGATCGCGCT GTTTGCAGTT CCGTGGACAG CCTTTTCGGT GTTTTGGATG
TGGGCAGCGC TGGGTTTCCA GTTACCCAAT CTCAGTCGAG GATTTCAGCC ACAATATCTG
TTTGCGATGT TTGGCTTGCC ATTTTTTCTC ATTGGGATTG GCATGCTGCT GAGTCCTTTT
TGGAGTTGGC GCCAGGCTTT TCAAACGGTC TATATCATTA CCAATCAACG GGCGATTACC
TTTGAAGGGG CCGGTAAGAC AACAATTCGT AGTTACTATC CACAGCAGTT CAATAATCTC
TATCGTAAGG AAGGGAATAA CGGGATTGGC GACGTGATTA TCGCGGCCGA AACGACCCGA
GATAGTGACG GCGATCGCCA ACGACGCGAA TTAGGCTTTT TCAATATTCG CGATCCAAGG
GAGGTAGAAG CGATCCTCAA GAAACTGGTG CAAGAAAAAC GGTAA
|
|---|
| Protein sequence | MSSGLKISPQ LRQKIDRELD LREKILWIGQ PAPSLMILTG GTLAIALFAV PWTAFSVFWM
WAALGFQLPN LSRGFQPQYL FAMFGLPFFL IGIGMLLSPF WSWRQAFQTV YIITNQRAIT
FEGAGKTTIR SYYPQQFNNL YRKEGNNGIG DVIIAAETTR DSDGDRQRRE LGFFNIRDPR
EVEAILKKLV QEKR
|
|---|
| |