Gene Synpcc7942_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0006 
Symbol 
ID3774226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp7779 
End bp8192 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID637798411 
Producthypothetical protein 
Protein accessionYP_399025 
Protein GI81298817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.83651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.21368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCA TTTTCTGGCT GGGGATTTCC TTTTTATTAG TTGCTTCCAG CTTGTCAGTA 
CTGCTCTGGG TGGCCGTTCC AGCCGTGCAA GAACTGGCTC GAACGGCTCG GAGTGCGCAG
CGCCTGTTGG ATATGCTCTC CCGTGAACTG CCACCAACGC TAGAAGCCAT GCGGCTGACT
GGCCTAGAAG TGAGTGAGCT AACGGATGAG ATGAGTGAAA GCATCCGCAG TGCGGGTTCT
GTGGTCAAGC AACTGGATGC AGGACTACAG GGCGTGCGGG AGCAAGCCAC GAATGCTCAG
CGCACGACTC GCAGTTTGAC GGCAGGAGTC AAAGCCGCCT GGCGATCGCT CCACGCCGCG
CAGCCCTCTA CCAACAATCG CTCCAGTTCT GTACCAGATT CAAAAGATCG TTAG
 
Protein sequence
MTPIFWLGIS FLLVASSLSV LLWVAVPAVQ ELARTARSAQ RLLDMLSREL PPTLEAMRLT 
GLEVSELTDE MSESIRSAGS VVKQLDAGLQ GVREQATNAQ RTTRSLTAGV KAAWRSLHAA
QPSTNNRSSS VPDSKDR