Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2043 |
Symbol | |
ID | 3743003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1951269 |
End bp | 1953122 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637772240 |
Product | peptidase M41, FtsH |
Protein accession | YP_378044 |
Protein GI | 78185610 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAGC GTTGGCGAAA CATCGGGCTT GGTGCCCTAT TGGTCTTGGC CATTGTCGTG ATTGCACCAG CCTTCTTTGG CGGTGGCGGC GGTGGAAATC AGCCCCAGGT CAACACCATT CGCTACAGCG AATTTGTTGA GGCCGTCAAG GATGACCAGA TCAGCCGTGT GCTGATCGCA CCCGATCAAG GCACAGCCCA AGTGGTTGAG AACGACGGTC GCCGGGCTCA AGTCAACCTT GCCCCCGATC GTGAGTTGCT TGGTCTGCTG ACTCAGCACA ACGTCGACAT TGCTGTCCAG CCCTCCCGTC AAACACCGGG TTGGCAGCAG GCGGCGGGAA GTCTGGTTTT CCCGCTTCTC CTACTTGGTG GCTTGTTTTT CTTGTTCCGC CGTGCCCAGG GTGGCGGTGG TGGCAATCCC GCCATGCAGT TTGGGAAAAG CAAGGCACGG GTCCAAATGG AGCCGTCAAC GCAAATCACA TTCAGCGATG TTGCCGGGAT CGAGGGCGCC AAGCTCGAGC TCACAGAGGT CGTCGACTTC CTTAAAAATC CCGATCGCTT TACCGCCGTT GGAGCCAAAA TCCCCAAAGG CGTTTTGTTA GTCGGCCCTC CAGGTACTGG TAAAACGTTG CTCGCCAAAG CCGTCGCTGG TGAAGCTGGG GTTCCCTTCT TCTCGATTTC CGGTTCAGAA TTTGTCGAAA TGTTCGTTGG CGTTGGTGCA AGCCGCGTGC GCGACTTGTT CGAACAGGCG AAAAAGAATG CTCCTTGCAT CGTCTTTATC GACGAGATCG ATGCGGTTGG ACGCCAGCGT GGTGCCGGCC TTGGCGGTGG TAATGACGAA CGCGAACAAA CCCTCAACCA GCTCCTGACT GAGATGGATG GTTTTGAGGG GAACACCGGC ATCATCATCG TTGCTGCCAC CAACCGACCT GACGTACTCG ACGCAGCACT CATGCGCCCA GGTCGCTTCG ACCGTCAGGT GACCGTCGAT CGCCCTGACT ATTCCGGGCG TCTCCAGATC TTGGGGGTCC ATGCCCGTGG AAAAACCTTG GCGAAGGACG TTGACCTCGA CAAAGTTGCG CGTCGTACAC CCGGGTACAC CGGTGCTGAT CTTGCGAACC TCTTAAATGA AGCCGCAATT TTGGCGGCTC GCCGTGAGTT GACGGAAGTC AGCAACGACG AGATCAGTGA TGCAATTGAG CGCGTTATGG CCGGTCCTGA GAAAAAGGAT CGGGTCATGA GTGAACGCCG TGCACGCTTG GTGGCTTATC ACGAGGCAGG CCATGCCCTC GTCGGTGCTC TGATGCCTGA TTACGACCCC GTTCAAAAGA TTTCGATCAT TCCTCGCGGC AATGCCGGCG GTCTCACGTT CTTCACGCCA AGTGAAGAAC GGATGGAATC AGGTTTGTAC TCCCGCGCTT ATCTCCAAAA TCAAATGGCG GTTGCCCTGG GTGGTCGCGT TGCTGAAGAG ATTGTCTACG GCGAAGACGA AGTCACCACA GGTGCTTCGA ACGACCTTCA ACAGGTGGCT TCCACAGCCC GTCAGATGAT CACGCGTTTT GGCATGAGTG ATGTTCTCGG ACCAGTGGCC CTCGGCCGTG CCCAAGGAGG GATGTTCCTA GGCCGAGATA TCGCTGCTGA ACGAGATTTC TCTGAGGAAA CTGCCGCCAC GATCGACCAG GAAGTCTCCG AACTTGTGGA CGTCGCCTAC AAGCGTGCCA CCAAGGTTTT GGTGGATAAC CGCTCTGTTC TCGATGAGCT TGCGGGAATG TTGATCGAGC AGGAAACTGT TGATGCGGAG GAGCTTCAGG AGCTCTTGAT CAAGCGTGAC GTACGAGTTG CTGAATACGT CTGA
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Protein sequence | MNKRWRNIGL GALLVLAIVV IAPAFFGGGG GGNQPQVNTI RYSEFVEAVK DDQISRVLIA PDQGTAQVVE NDGRRAQVNL APDRELLGLL TQHNVDIAVQ PSRQTPGWQQ AAGSLVFPLL LLGGLFFLFR RAQGGGGGNP AMQFGKSKAR VQMEPSTQIT FSDVAGIEGA KLELTEVVDF LKNPDRFTAV GAKIPKGVLL VGPPGTGKTL LAKAVAGEAG VPFFSISGSE FVEMFVGVGA SRVRDLFEQA KKNAPCIVFI DEIDAVGRQR GAGLGGGNDE REQTLNQLLT EMDGFEGNTG IIIVAATNRP DVLDAALMRP GRFDRQVTVD RPDYSGRLQI LGVHARGKTL AKDVDLDKVA RRTPGYTGAD LANLLNEAAI LAARRELTEV SNDEISDAIE RVMAGPEKKD RVMSERRARL VAYHEAGHAL VGALMPDYDP VQKISIIPRG NAGGLTFFTP SEERMESGLY SRAYLQNQMA VALGGRVAEE IVYGEDEVTT GASNDLQQVA STARQMITRF GMSDVLGPVA LGRAQGGMFL GRDIAAERDF SEETAATIDQ EVSELVDVAY KRATKVLVDN RSVLDELAGM LIEQETVDAE ELQELLIKRD VRVAEYV
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