Gene Swoo_4693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4693 
Symbol 
ID6119062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5658171 
End bp5660267 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content46% 
IMG OID641636267 
Productelongation factor G 
Protein accessionYP_001763038 
Protein GI170729012 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000836363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000646786 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCTCGTA CAACTCCGAT TGAGCGCTAC CGAAATATCG GTATCTGTGC TCATGTTGAC 
GCAGGAAAAA CCACAACGAC AGAACGTGTT CTGTTCTATA CCGGTATGTC TCATAAGATC
GGTGAAGTTC ATGATGGTGC TGCCACCATG GATTGGATGG AACAGGAGCA GGAGCGTGGT
ATTACTATCA CCTCAGCTGC GACAACCACT TTCTGGCGTG GTATGGAGGC TCAATATTCT
GAGCACCGTA TCAACATCAT CGATACTCCA GGTCACGTTG ACTTCACAAT TGAAGTTGAA
CGTTCGCTGC GTGTACTTGA TGGTGCTGTA GTTGTTTTCT GTGGTTCGTC CGGTGTTGAA
CCACAATCTG AGACTGTTTG GCGTCAGGCT GATAAGTATC ATGTTCCTCG CATCGTATTC
GTCAATAAGA TGGATCGTGC TGGTGCTGAT TTTGACAGTG TGATTTCGCA GATCCGTAAC
CGTCTGGGAG CAACTTGTGT ACCTATTCAA ATGAATATTG GTGCAGAAGA GAATTTCAAA
GGCGTTATCG ACCTTATCAA GATGAAGGCT ATTAACTGGT CTGAAGCTGA TCAAGGTGCG
ACATTCGTCT ATGAAGATAT TCCTGCTGAG CTTGCTGATA AAGCGGCTGA AATGCGTGAA
TATCTCGTTG AAGCTGCAGC TGAAGCCTCT GAAGATCTGA TGGATAAATA CCTTGAAGAA
GGTGAGCTAT CAGAAGAAGA GATCAAGCTT GCATTGCGTC AACGTACTCT AGCTAACGAG
ATAGTCCTTG CTACTTGTGG TTCTGCATTT AAGAACAAAG GTGTGCAAGC GGTACTCGAT
GCTGTTGTTG ATTACTTGCC ATCTCCTATT GAGGTCCACG CAATCCGTGG CGTCAATGAG
AAAGAGGAAG AAGTTTTGTG TCCAGCGGAC GATGAAGCTC CTTTTGCTGC GTTGGCATTT
AAAATTGCAA CAGACCCATT TGTCGGTACG TTAACCTTTA TGCGCGTTTA TTCGGGTGTA
TTGGAGACCG GGGCTGCTGT TTACAATTCA GTTAAAGAAA AGCGGGAACG CATAGGTCGT
ATGGTGCAGA TGCACGCTAA TGACCGCCAA GAGATTAAAG AGGTTCGCGC TGGTGACATC
GCGGCAGCTA TTGGTCTTAA GGACGTAACT ACAGGTGATA CGCTTTGTGA CATGAGTCGT
AAAGTCATCT TAGAGCGTAT GGATTTCCCT GAGCCTGTTA TTACGATAGC CGTTGAACCA
AGATCTCAAG CCGATGAGCA GAAGATGGGT ATTGCGTTGC AAAAACTTGC AGCTGAAGAT
CCCTCTTTCC GTGTTGAAAC AGATCCAGAA TCTGGTCAAA CACTGATCTC GGGTATGGGT
GAGTTACACC TTGATATTAT TGTCGACCGT ATGCGTCGTG AATTTAGTGT TGAGTGTAAC
GTAGGTAAAC CACAAGTCGC TTATCGTGAA ACTATTCGCT CAAGTGTAGA AGTCGAAGGT
AAATTTGTTC GTCAATCAGG TGGTCGGGGT CAATTCGGTC ATGTTTGGTT GAAACTAGAG
CCTCAAGAAG AGGGCTTTGG GTACGAATTT GCCAACGAGA TTGTTGGTGG TGCTGTTCCA
AAAGAATACA TCCCAGCAGT TGATAAAGGT ATTCAAGAGC AGATGAAGAG TGGCGTTATC
GCTGGCTTCC CTCTTTTGGA TGTGAAAGTT ACTTTGTTTG ATGGTTCATA TCATGATGTG
GACTCGAACG AAATGGCCTT CAAGGTTGCA GGTTCAATGG GCTTTAAGAA GGGCGCTTTA
GAAGCTGATC CTGTACTATT AGAACCTTGC ATGAAAGTTG AAGTCACAAC GCCTGAAGAT
TATATGGGTG ATGTGGTCGG AGACTTGAAC CGTCGTCGTG GCTTGATCGA AGGTATGGAT
GACGGCATTG CCGGCGTCAA ACTTGTTCAC GCTACAGTAC CTCTATCTGA AATGTTTGGA
TATGCAACTG ATTTGCGCAG TGCAACTCAG GGACGTGCTT CTTACTCAAT GGAGTTTTTG
AAGTACTCTG ACGCACCGCA GAACATTGCA AAAGCGGTTA TGGAAGCACG AGGCTAA
 
Protein sequence
MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGMSHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTT FWRGMEAQYS EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGSSGVE
PQSETVWRQA DKYHVPRIVF VNKMDRAGAD FDSVISQIRN RLGATCVPIQ MNIGAEENFK
GVIDLIKMKA INWSEADQGA TFVYEDIPAE LADKAAEMRE YLVEAAAEAS EDLMDKYLEE
GELSEEEIKL ALRQRTLANE IVLATCGSAF KNKGVQAVLD AVVDYLPSPI EVHAIRGVNE
KEEEVLCPAD DEAPFAALAF KIATDPFVGT LTFMRVYSGV LETGAAVYNS VKEKRERIGR
MVQMHANDRQ EIKEVRAGDI AAAIGLKDVT TGDTLCDMSR KVILERMDFP EPVITIAVEP
RSQADEQKMG IALQKLAAED PSFRVETDPE SGQTLISGMG ELHLDIIVDR MRREFSVECN
VGKPQVAYRE TIRSSVEVEG KFVRQSGGRG QFGHVWLKLE PQEEGFGYEF ANEIVGGAVP
KEYIPAVDKG IQEQMKSGVI AGFPLLDVKV TLFDGSYHDV DSNEMAFKVA GSMGFKKGAL
EADPVLLEPC MKVEVTTPED YMGDVVGDLN RRRGLIEGMD DGIAGVKLVH ATVPLSEMFG
YATDLRSATQ GRASYSMEFL KYSDAPQNIA KAVMEARG