Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4525 |
Symbol | |
ID | 6118891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5486517 |
End bp | 5489240 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641636096 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001762870 |
Protein GI | 170728844 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000405863 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000659986 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTGGTA AATTACTGAC AAAATTATTT GGTAGTCGTA ACGATCGTAC ACTTAAATCT CTTGGCAAAA TTGTCACTAA GATTAATGCT CTTGAAGATG ACTATGAAAA GTTAACCGAT GACGAGTTAA AGTCTAAGAC ATCTGACTTT CGCAACCGTT TAGAATCAGG CGAAACTCTG GATGATGTCA TGCCTGAAGC GTTTGCCGTT GTACGTGAAG CCTCTAAGCG TGTTTTTGAG ATGCGTCACT TCGATGTGCA GATGCTTGGT GGTATGGTGC TCGACAGTAA CCGTATTGCC GAGATGCGTA CCGGTGAAGG TAAAACATTA ACCGCCACAC TACCTGCTTA CCTTAATGGA TTAACAGGTA AGGGTGTTCA CGTCATTACA GTTAACGATT ACTTGGCACG TCGTGATGCT GAAAATAACC GTCCACTGTT TGAGTTTTTA GGACTTTCTG TTGGCATTAA CGTTGCGGGT CTAGGCCAGC AAGAGAAGAA AGATGCCTAC AATGCCGATA TCACTTACGG CACCAATAAT GAATTCGGCT TCGATTATCT ACGCGATAAC ATGGCTTTTT CACCAGCTGA ACGTGTTCAG CGTCCGCTAC ACTACGCCCT AATCGATGAG GTCGATTCGA TCTTAATCGA TGAAGCACGA ACTCCATTGA TCATCTCTGG CGCCGCCGAA GATAGTTCTG AGCTTTACAC TAAGATTAAT ACCCTTATTC CGCACCTTAT TCGTCAAGAT AAAGAGGATA CGGAAGAGGA GATCGGTGAA GGTGATTACT CCATCGACGA GAAAGCTAAA CAAGTTCATA TGACTGAACG CGGTCAGGAG AAGGTAGAAG TCCTTCTGAC TGAACGTGGC ATGCTAGCTG AAGGTGATTC ACTCTATTCA GCGGCCAACA TCTCTTTGCT TCACCATGTT AATGCGGCAC TTCGTGCGCA TACTCTGTTT GAGAAAGATG TCGACTATAT TGTGCAAGAC AATGAAGTAA TTATTGTTGA TGAGCATACA GGTCGTACAA TGCCTGGTCG TCGTTGGTCT GAAGGTCTTC ATCAAGCGGT AGAAGCAAAA GAGGGAGTTC ATATTCAAAA TGAAAACCAA ACTTTAGCAT CAATCACTTT CCAGAATTTC TTCCGCCAGT ATGACAAGTT AGCGGGTATG ACAGGTACAG CTGATACCGA AGCTTTCGAA TTTCAACATA TCTATGGCTT AGATACGGTT GTGATCCCAA CTAACAGACC TATGGTGCGT AAGGACCATG CGGATCTTGT TTACCTGACT CCAGATGAAA AGTATGCTGC GATTATTCAG GATATCCAAG GCTGTCGTGA ACGCGGTCAG CCAGTGCTTG TGGGTACAGT TTCCATTGAA CAGTCTGAGC TTCTTGCAAG ATTAATGAAG CAAGAAAAGA TCCCACACGA AGTACTAAAC GCTAAGTTCC ATGAGCGTGA AGCTGACATT GTTGCCCAAG CTGGTCGAAC AGGTGCTGTC ACTATTGCTA CCAACATGGC GGGTCGTGGT ACCGATATCG TATTGGGTGG CAATTGGAAC ATGGAGATCG ATGCCCTTAG TAATCCAACT GATGAGCAGA AAGCCAAGAT TAAAGCCGAT TGGCAAATAA GACACGATGA AGTTGTCGCT GCCGGTGGTT TACATATCTT AGGTACTGAG CGACATGAGT CTCGCCGTAT CGATAACCAG TTACGTGGTC GTTCTGGTCG TCAAGGTGAT GCAGGTTCAT CACGCTTCTA CTTATCAATG GAAGATAGCT TAATGCGTAT CTTCGCTTCA GATAAAGTGA CTGGCATGAT GAAGAGACTG GGTATGGAAG AAGGCGAAGC CATCGAACAT CCTTGGGTTT CACGTGCTAT TGAAAACGCA CAGCGTAAAG TAGAAGCACG TAACTTCGAT ATCCGTAAGC AGCTACTTGA GTTTGATGAC GTGGCCAACG ATCAGCGTCA AGTGGTTTAC GCTCAACGTA ATGAGCTGAT GGACGCGGAA AGTATTCAAG ATACTATTGT TAATATCCAA GCTGACGTCG TTAATGGCCT TGTTGATCAA TATATTCCAC AGCAATCAGT GGAAGAGCTT TGGGATGTTC CAGGTCTTGA AACTCGCTTA ACCCAAGAGT ATGGGCTGAA AATGCCAATA CAGGAGTGGT TAGATACAGA GACAGATCTG CATGAAGAAA CCCTACGTGA ACGTATTGTT GATACTTGGG TTAAGGCTTA TCAATCCAAA GAGGAGATGG TTGGCGAATC TGTATTACGT CAATTTGAAA AAGCCGTCAT GTTGCAAACT CTTGACGGAC TTTGGAAAGA ACACTTAGCA GCGATGGATC ATCTTCGTCA GGGAATTCAC TTGCGTGGCT ATGCGCAGAA GAATCCTAAG CAAGAATATA AGCGTGAATC ATTTGAGCTT TTCCAGCAGA TGCTTGAGTC ATTAAAGCAT GATGTCATTA GTGTGCTCTC TAAAGTACAG GTTCAGGCAC AATCTGATGT GGAAGAGATG GAAGAGCGTC GTCGTCAAGA AGATGCCAAA ATCCAACGTG ATTACCAGCA TGCTGCAGCC GAAGCACTCG TCGGTGCAGA GGAAGCAGAA GCACTAGCGG CTCACACACC TACAGTACGT GAAGGTGAAA AGGTTGGACG TAATGATCCT TGCCCATGTG GCTCGGGTCG TAAATATAAG CAGTGTCATG GAAAGCTAAC TTAA
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Protein sequence | MFGKLLTKLF GSRNDRTLKS LGKIVTKINA LEDDYEKLTD DELKSKTSDF RNRLESGETL DDVMPEAFAV VREASKRVFE MRHFDVQMLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNG LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLSVGINVAG LGQQEKKDAY NADITYGTNN EFGFDYLRDN MAFSPAERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYTKIN TLIPHLIRQD KEDTEEEIGE GDYSIDEKAK QVHMTERGQE KVEVLLTERG MLAEGDSLYS AANISLLHHV NAALRAHTLF EKDVDYIVQD NEVIIVDEHT GRTMPGRRWS EGLHQAVEAK EGVHIQNENQ TLASITFQNF FRQYDKLAGM TGTADTEAFE FQHIYGLDTV VIPTNRPMVR KDHADLVYLT PDEKYAAIIQ DIQGCRERGQ PVLVGTVSIE QSELLARLMK QEKIPHEVLN AKFHEREADI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIDALSNPT DEQKAKIKAD WQIRHDEVVA AGGLHILGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDSLMRIFAS DKVTGMMKRL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY AQRNELMDAE SIQDTIVNIQ ADVVNGLVDQ YIPQQSVEEL WDVPGLETRL TQEYGLKMPI QEWLDTETDL HEETLRERIV DTWVKAYQSK EEMVGESVLR QFEKAVMLQT LDGLWKEHLA AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQMLESLKH DVISVLSKVQ VQAQSDVEEM EERRRQEDAK IQRDYQHAAA EALVGAEEAE ALAAHTPTVR EGEKVGRNDP CPCGSGRKYK QCHGKLT
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