Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3741 |
Symbol | |
ID | 6118090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4554563 |
End bp | 4555897 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635304 |
Product | amidohydrolase |
Protein accession | YP_001762095 |
Protein GI | 170728069 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA ATAACAATAG AGCCGCAAAA CTTACCCCAT TGAGCAGAAC TTCTTTACTG TTAGCAGGAT TAACGACACT GGCTTTAGCT ACCCCCGCGA TGGCAGCAAA TATCACTGTG ATACATGCTG GTGAACTACT AGTGACTCCA GGTAATAAAC CGCTTAAGCA GCAGACATTA GTTATTGAAA ACGGGACAAT TAAGGATGTT AAGCCGGGAT ATTTAGCTGC TAAAACTTTT AGTGATAATG TTCAGGTTAT CGATCTTAAG GAGCATTTTG TTATGCCTGG ATTGATGGAC ATGCATGTTC ATCTTCAAGG GGAGCTTAGT CCTAAGAATG ATAGTGAGAA GCTACGCATG TCAGATGCTG AAGTGGCGAT TCGCAGCGCC TATTTTGCTA AAAAAACCTT AATAGCGGGT TTCACTACGG TTCGCGATTT AGGGGCTAAG CCGGAACAGA TTTATGCTCT AAGAGATGGA ATTGAGAGGG GCTGGGTTGA TGGGCCTCGT ATTATCGCCT CTGGTGGCGT TTCAGTGACT GGAGGGCATG GAGATGTGGA TGGTATGAGT CCAGACCTAC TTGAGAAGTA CACCTCTAAA ACGATTTGTG ACGGACCTTA TGATTGTCGA AGTGCTACAA GACGTGCAAT TAAGTTTGGC GCCGATGTGA TTAAGATAAC CTCTACGGGA GGTGTGCTGT CTGATACCAA TACAGGCACA GGTCAGCAGA TGGCCGATGA TGAGCTTAAA GAGATTGTTG ATACTGCTCA TGGGCTTGGG CGTAAGGTCG CGAGCCATGC CCATGCGACT CAGGGGATTA ATGCCGCTCT GCGCGCAGGT GTTGATAGTA TCGAGCACGG CAGTTATGCG GACAAGGAGA GTATTAAACT GCTGAAGAAA AATGGGGCGT ATCTGGTTCC GACGCTGCTT GCGGGCGATA CTGTGGTCGG GATGGCTAAG ACATCCGATT TTATGTCTGA GGACATTAAG GCTAAAGCGG AACGAGTTGG TGCTGATATG ACGGCAAACT TTATCGCCGT GCATCAGGCA GGTGTGAAGA TAGCCTATGG AACTGATAGC GGGGTGTCCC AACATGGTAC CAATGCTCGC GAAGCGGTGT TGATGCATCA AGCTGGGATG TCGAGTTCAG ACATCTTAAA GTCAGCGACA GTCAATGGCG CCGATCTTAT CGATATGTCG GATGAACTAG GGACTCTGGA GGTTGGCAAG TTTGCTGATA TCATTGCAAC CGATACGAGC CCTCTTGAGG ATATTGAGGC TCTATTGGAT GTCGACTTTG TGATGAAAGG CGGTAAAGTG TATAAGAATA AGTAG
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Protein sequence | MKNNNNRAAK LTPLSRTSLL LAGLTTLALA TPAMAANITV IHAGELLVTP GNKPLKQQTL VIENGTIKDV KPGYLAAKTF SDNVQVIDLK EHFVMPGLMD MHVHLQGELS PKNDSEKLRM SDAEVAIRSA YFAKKTLIAG FTTVRDLGAK PEQIYALRDG IERGWVDGPR IIASGGVSVT GGHGDVDGMS PDLLEKYTSK TICDGPYDCR SATRRAIKFG ADVIKITSTG GVLSDTNTGT GQQMADDELK EIVDTAHGLG RKVASHAHAT QGINAALRAG VDSIEHGSYA DKESIKLLKK NGAYLVPTLL AGDTVVGMAK TSDFMSEDIK AKAERVGADM TANFIAVHQA GVKIAYGTDS GVSQHGTNAR EAVLMHQAGM SSSDILKSAT VNGADLIDMS DELGTLEVGK FADIIATDTS PLEDIEALLD VDFVMKGGKV YKNK
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