Gene Swoo_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3741 
Symbol 
ID6118090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4554563 
End bp4555897 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content47% 
IMG OID641635304 
Productamidohydrolase 
Protein accessionYP_001762095 
Protein GI170728069 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA ATAACAATAG AGCCGCAAAA CTTACCCCAT TGAGCAGAAC TTCTTTACTG 
TTAGCAGGAT TAACGACACT GGCTTTAGCT ACCCCCGCGA TGGCAGCAAA TATCACTGTG
ATACATGCTG GTGAACTACT AGTGACTCCA GGTAATAAAC CGCTTAAGCA GCAGACATTA
GTTATTGAAA ACGGGACAAT TAAGGATGTT AAGCCGGGAT ATTTAGCTGC TAAAACTTTT
AGTGATAATG TTCAGGTTAT CGATCTTAAG GAGCATTTTG TTATGCCTGG ATTGATGGAC
ATGCATGTTC ATCTTCAAGG GGAGCTTAGT CCTAAGAATG ATAGTGAGAA GCTACGCATG
TCAGATGCTG AAGTGGCGAT TCGCAGCGCC TATTTTGCTA AAAAAACCTT AATAGCGGGT
TTCACTACGG TTCGCGATTT AGGGGCTAAG CCGGAACAGA TTTATGCTCT AAGAGATGGA
ATTGAGAGGG GCTGGGTTGA TGGGCCTCGT ATTATCGCCT CTGGTGGCGT TTCAGTGACT
GGAGGGCATG GAGATGTGGA TGGTATGAGT CCAGACCTAC TTGAGAAGTA CACCTCTAAA
ACGATTTGTG ACGGACCTTA TGATTGTCGA AGTGCTACAA GACGTGCAAT TAAGTTTGGC
GCCGATGTGA TTAAGATAAC CTCTACGGGA GGTGTGCTGT CTGATACCAA TACAGGCACA
GGTCAGCAGA TGGCCGATGA TGAGCTTAAA GAGATTGTTG ATACTGCTCA TGGGCTTGGG
CGTAAGGTCG CGAGCCATGC CCATGCGACT CAGGGGATTA ATGCCGCTCT GCGCGCAGGT
GTTGATAGTA TCGAGCACGG CAGTTATGCG GACAAGGAGA GTATTAAACT GCTGAAGAAA
AATGGGGCGT ATCTGGTTCC GACGCTGCTT GCGGGCGATA CTGTGGTCGG GATGGCTAAG
ACATCCGATT TTATGTCTGA GGACATTAAG GCTAAAGCGG AACGAGTTGG TGCTGATATG
ACGGCAAACT TTATCGCCGT GCATCAGGCA GGTGTGAAGA TAGCCTATGG AACTGATAGC
GGGGTGTCCC AACATGGTAC CAATGCTCGC GAAGCGGTGT TGATGCATCA AGCTGGGATG
TCGAGTTCAG ACATCTTAAA GTCAGCGACA GTCAATGGCG CCGATCTTAT CGATATGTCG
GATGAACTAG GGACTCTGGA GGTTGGCAAG TTTGCTGATA TCATTGCAAC CGATACGAGC
CCTCTTGAGG ATATTGAGGC TCTATTGGAT GTCGACTTTG TGATGAAAGG CGGTAAAGTG
TATAAGAATA AGTAG
 
Protein sequence
MKNNNNRAAK LTPLSRTSLL LAGLTTLALA TPAMAANITV IHAGELLVTP GNKPLKQQTL 
VIENGTIKDV KPGYLAAKTF SDNVQVIDLK EHFVMPGLMD MHVHLQGELS PKNDSEKLRM
SDAEVAIRSA YFAKKTLIAG FTTVRDLGAK PEQIYALRDG IERGWVDGPR IIASGGVSVT
GGHGDVDGMS PDLLEKYTSK TICDGPYDCR SATRRAIKFG ADVIKITSTG GVLSDTNTGT
GQQMADDELK EIVDTAHGLG RKVASHAHAT QGINAALRAG VDSIEHGSYA DKESIKLLKK
NGAYLVPTLL AGDTVVGMAK TSDFMSEDIK AKAERVGADM TANFIAVHQA GVKIAYGTDS
GVSQHGTNAR EAVLMHQAGM SSSDILKSAT VNGADLIDMS DELGTLEVGK FADIIATDTS
PLEDIEALLD VDFVMKGGKV YKNK