| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3341 |
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| Symbol | |
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| ID | 6117673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4094879 |
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| End bp | 4097455 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634897 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001761705 |
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| Protein GI | 170727679 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.285192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000411572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAGCGA TCGACAGCCA AGATTTAGAA AAACATACCC CTATGATGCG TCAGTATTTG
ACTTTAAAAG CCGAAAATCC AGATGTACTT CTTTTCTACC GTATGGGCGA TTTCTATGAG
CTTTTTTACG ATGATGCCAA GAAGGCATCT GAGCTATTAG GGATCTCACT TACAGCAAGA
GGCAAAAGTG GTGGTGATCC TATCCCTATG GCTGGCCTTC CCTACCACGC TGTAGAGGGC
TATTTGGCAA AGCTGGTTCA ACTGCGAGTT TCGGTTGCTA TCTGTGAACA AGTTGGCGAT
CCAGCGACAT CTAAAGGCCC GGTTGAGCGT AAGGTGGTTC GACTCGTCAC ACCAGGCACA
CTCACCGATG AAGCGTTACT GCAGGAGAGA CAAGATAATC TACTTGCAGC GGTTTATCAC
GGTAAAAAAG GCTTTGGCTA TGCCACATTA GATATTAGTT CGGGGCGATT TGTCATTGCG
GAACTTGAGT CCTGTGAAGC ACTAGAAGCA GAGCTTCAAC GTACCAGTCC AGCTGAGCTT
CTCTACAGTG AAGACTTCTC TGAGATGAGC CTGATTTCAG CATTTGAAGG CACCCGCCGT
CGCCCTGAGT GGGAGTTTGA TTTCGACACA AGTCAAAAGC TTCTGCTTGA TCAATTTGGT
ACCAAAGATC TGCAAGGTTT TGGGTTAGAT GGTGCTCGGC TATCTCTTCA GGCAGCCGGT
TGTCTTATGC AGTACGTAAA AGACACTCAA CGCACAGCAC TCCCTCATAT CAACTCAATA
GTCAGGTTTA ATCAAGGCGA TAGCATCATT CTCGATGCTG CAACCAGACG TAACCTAGAG
CTAACGATGA ACCTCCAAGG GGGCCACTCA AATACGCTTG CCACTGTGCT CGATAATACA
ACGACTCCGA TGGGAAGTCG TATGTTACAA AGATGGATCC ACGAGCCACT GCGTGATCGT
CAGCGTATCG AAGCGCGTCA AAGCGCCCTC GAAGAGATAT TGGAGAATGG TCTCTATGAT
GAGTTGCACC CTCTATTAAA GTCACTGGGT GATGTTGAGC GGATAACCGC GAGGCTTGCA
TTGAGAAATG CACGTCCCAG AGACTTCTCT CGCCTTAAGC ATGCCTTAGC GATACTGCCA
GAGATCCAAC AAATACTGGC CAGATGCCAA TCGGCTCACC TTCAATCTTT AGCTAGAATT
ATCAGTGAGT TTCCAGAGGA ACTAGCATTA CTTGATAGTG CGATCGTCGA TAATCCTCCT
ATGCTTATCC GTGATGGTGG GGTGTTAAAG CCTGGCTACA ATGCTGAATT AGATCAATGG
CGTGACCTAA GCCAAGGCGC AACAGACTAC TTAGCTGAGC TTGAGGCAAG AGAAAAAGAG
GCCACTGGCA TCTCGACGCT AAAAGTCGGC TACAATCGTG TACACGGTTA CTATATTGAG
GTCAGTCGGA GAGAATCTGA TCTTGTGCCT CTGAGTTACC AGCGCAGACA GACACTGAAA
AATACTGAGC GTTATATTGT CGCAGAGCTA AAGGAGCACG AAGAGAAAGT GCTCTCCAGC
CAAGGCAAAG CCCTAGCCCT TGAGAAGCAA CTATGGGATC AACTGTTCGA TCTTATCTTG
CCTCAGCTCC ATGAATTGCA ACTTTTCGCC CAAGGTGCAG CAGAGCTAGA TGTACTCGCA
AACTTTGCAG AGCGAGCCGA CACGCTCAAC TATCAAAGAC CAGTGTTAAC CGATATCCCT
GGTATTCAAA TAGAGTCTGG TCGACACCCT GTAATTGAAC AGGTGAGTCA AACTCCATTC
ATTGCCAATC CAGTGACCTT AAGTCCTGCG AGAAAGATGT TGATAGTGAC AGGTCCAAAT
ATGGGCGGTA AATCGACCTA TATGAGGCAA GTGGCCTTAA TCACCTTGAT GGCACATATA
GGCTGTTATG TTCCAGCTCA AAGCGCGACT ATCGGCCCAG TTGATCGCAT ATTCACTCGC
ATAGGCGCCG CCGATGATCT CGCCTCTGGT CGCTCAACCT TTATGGTCGA GATGACTGAA
ACCGCCAATA TACTTCACAA TGCGACACCA AAGAGTTTAG TACTGATGGA TGAGATAGGT
CGAGGCACAT CGACTTACGA TGGTCTATCT CTAGCTTGGT CTGCGGCGGA ATATTTAGCG
CAGAAAATTG AGGCCATGAC ACTATTCGCA ACTCACTATT TTGAGCTAAC TCAACTACCA
GAGCTAATAT CAAATGTGGC GAATGTACAC TTAGATGCAA TTGAACACGG TGACACGATC
GTCTTTATGC ACGCAGTGCA AGATGGCGCG GCCAGCAAGA GTTACGGACT TCAAGTTGCC
GCACTTGCAG GAGTACCTAA CCCTGTCATT TTGGCTGCAA AACACAAGCT ACACCATCTG
GAAAGCCGTG ATAATCACAA TACACAGCAG ACAGACTCAA GTGGTGTACA GCAAAGTATG
GTATTTCCAG ACCCTATAAA ATCACCTCTT GAGGAGGCGA TGGAATCAAT CAGGCCAGAT
GAGCTTAGCC CTAAACAGGC TTTGGATATC CTGTATAGAT TAAAGGATTT AAGTTAA
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| Protein sequence | MKAIDSQDLE KHTPMMRQYL TLKAENPDVL LFYRMGDFYE LFYDDAKKAS ELLGISLTAR
GKSGGDPIPM AGLPYHAVEG YLAKLVQLRV SVAICEQVGD PATSKGPVER KVVRLVTPGT
LTDEALLQER QDNLLAAVYH GKKGFGYATL DISSGRFVIA ELESCEALEA ELQRTSPAEL
LYSEDFSEMS LISAFEGTRR RPEWEFDFDT SQKLLLDQFG TKDLQGFGLD GARLSLQAAG
CLMQYVKDTQ RTALPHINSI VRFNQGDSII LDAATRRNLE LTMNLQGGHS NTLATVLDNT
TTPMGSRMLQ RWIHEPLRDR QRIEARQSAL EEILENGLYD ELHPLLKSLG DVERITARLA
LRNARPRDFS RLKHALAILP EIQQILARCQ SAHLQSLARI ISEFPEELAL LDSAIVDNPP
MLIRDGGVLK PGYNAELDQW RDLSQGATDY LAELEAREKE ATGISTLKVG YNRVHGYYIE
VSRRESDLVP LSYQRRQTLK NTERYIVAEL KEHEEKVLSS QGKALALEKQ LWDQLFDLIL
PQLHELQLFA QGAAELDVLA NFAERADTLN YQRPVLTDIP GIQIESGRHP VIEQVSQTPF
IANPVTLSPA RKMLIVTGPN MGGKSTYMRQ VALITLMAHI GCYVPAQSAT IGPVDRIFTR
IGAADDLASG RSTFMVEMTE TANILHNATP KSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
QKIEAMTLFA THYFELTQLP ELISNVANVH LDAIEHGDTI VFMHAVQDGA ASKSYGLQVA
ALAGVPNPVI LAAKHKLHHL ESRDNHNTQQ TDSSGVQQSM VFPDPIKSPL EEAMESIRPD
ELSPKQALDI LYRLKDLS
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