Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2596 |
Symbol | |
ID | 6116893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3173701 |
End bp | 3175074 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641634126 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001760968 |
Protein GI | 170726942 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.338905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTAC CAATATCAGG CCTTTTTTCA CATCTGCAGT TTAAATTATT CAGCTATTTT GCCATCTCAC TTTTAGCTAT TTTACTGATA GCAACCGCCA TTGAAAGCTT GGTATTAAAT AAATTGCTCA CTTTACCTTC AACCACACAG GAGCAGCTCA CAGAACTTGC CAGTGAAGCA AAAGTTTTTA TTAGAAACAG CGATATAGAG GGGTTAACTC AATGGGAAAA ACAGCAGGTA TTCACGCTTT TTATTCTCAA TAACGATCTT CAAGCGCTCA CTAAGCGAGA GATGCATCCT CATTTTGTTT TTAAGCTTAA GTATTTAAAG CAGCTTAAAC AACCGATGGG GGATCGTGTT CAAAAGCCCT TAATCGCTGT TCCTTTGGGT AAGCACCTTA TCAATAATAA AAGGCAAGAG TTAACGTTAG TGGTGCAGCT CAATGCTGCA CTTCATCCAG CACAACAGCT AAGTAGTAGC TTATGGGTAA TCCGCACACT TGTCGGTTTT GCTGTACTCG TGATGTTTAG CTCCATCCTA AGCAAATACT TAATCACTCC GCTCACACAC CTGCAAGCTG GCACACAAGC ATTAGCAAGT GGAGATCTTA ATACCCGTAT TGCTCAGCAC TTCTCCACCA AAGAGCCTGA GTTTTATAAG TTAGCCACAG AGTTTGACCA TATGGCTGAG CAAGTTCAGC AGTCGATGCT TAACCAACAA AGATTATTAA GGGATGTTTC ACATGAGCTG CGTACCCCGT TAGCTAGACA AGAGCTGGCA CTTCACCTTT TAAGCAAACA ACTTAATGAC TCACATCTTA CTCTGTTACA TAGACTTGAA CATGAAAATG CAGAGATGTC AGCATTGATC AATACCATGC TTAACTTCAG TCGACTTAAC AACGCTTATA TTGATCTCAA CATACAAGCA GTTCCAATCA ATGAGATCCG CAGTAGATCA CTTAACGATA TTGAATTCGA GGCGAAAGCG GGACAAACCA TTATCTGGCA CTCTCAGCCA GACACTGTCA CTCTGATCAC TGATGTAGGC CTATTGACTC GTGCCATAGA CAACGTACTC AGAAATGCAC TTAAGTATGC GGGAGAGTGC TGCACCATAG AAGTGAGCTA CATTAAGAGC CCTAACGGCG TTGTTCTTAC CATTATGGAT GATGGCCCAG GGATTGAGCA CTCAGAGTTA GAGACCGTAT TTAACCCTTT CACTCGTATG GATGATGCAA GGCATTCAAG TCAAGGGGGT TATGGCTTAG GATTAGCGAT AGTAAAACAG AGCATGAAAC TGTTAGGAGG CGAAGCTGTT GCCGAAAATG TAGATAAAGG CGGCTTAAAA ATTAGTTTAC ATCTTCCCAG TTAG
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Protein sequence | MLLPISGLFS HLQFKLFSYF AISLLAILLI ATAIESLVLN KLLTLPSTTQ EQLTELASEA KVFIRNSDIE GLTQWEKQQV FTLFILNNDL QALTKREMHP HFVFKLKYLK QLKQPMGDRV QKPLIAVPLG KHLINNKRQE LTLVVQLNAA LHPAQQLSSS LWVIRTLVGF AVLVMFSSIL SKYLITPLTH LQAGTQALAS GDLNTRIAQH FSTKEPEFYK LATEFDHMAE QVQQSMLNQQ RLLRDVSHEL RTPLARQELA LHLLSKQLND SHLTLLHRLE HENAEMSALI NTMLNFSRLN NAYIDLNIQA VPINEIRSRS LNDIEFEAKA GQTIIWHSQP DTVTLITDVG LLTRAIDNVL RNALKYAGEC CTIEVSYIKS PNGVVLTIMD DGPGIEHSEL ETVFNPFTRM DDARHSSQGG YGLGLAIVKQ SMKLLGGEAV AENVDKGGLK ISLHLPS
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