| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2223 |
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| Symbol | asnC |
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| ID | 6116493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2728011 |
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| End bp | 2729411 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633730 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_001760599 |
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| Protein GI | 170726573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000670625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00213208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTA CATCTGTCGC TTCTGTATTT AAAGGTGATT TTGCGATCGG TTCGCAAGTT
ACTGTTCGCG GTTGGGTAAG ATCCCGTCGA GATTCCAAGG CTGGGATCTC TTTTCTTGCC
GTTTATGATG GTTCCTGCTT TGACCCTATT CAGGGTGTAG TGCCAAATAG CTTAGCTAAT
TATAATGACG AAATCTTAAA GCTAACAGCT GGTTGCTCTG TTGTTATGAC TGGTGAAGTT
GTCGACTCTC CAGGTAAAGG TCAAGCTTTT GAACTTCAAG TCACTCAGGT TGAGGTCGCA
GGCTGGGTTG AAGATCCTGA TACCTACCCA ATGGCAGCTA AGCGTCACTC TATAGAGCAC
CTAAGAGAGC TAGCTCACTT GCGCCCTCGT ACCAATATTA TTGGTGCTGT TGCCCGCGTA
AGAAACAGCT TATCTCAGGC TATTCACCGC TTTTACAATG AAGAGGGCTT TATCTGGGTA
TCTACGCCAC TCATCACTGC ATCAGACTGT GAAGGTGCTG GAGAGATGTT CCGTGTTTCA
ACACTTGATA TGGAAAACCT GCCACGTACT GATGAGGGGA AAGTCGATTA CAGTGAAGAC
TTCTTCGGTA AAGAGTCTTT CTTAACCGTA TCTGGCCAAC TTAACGCAGA GACTTATGCA
AGTGCACTGT CTAAGGTTTA TACCTTCGGT CCCACTTTTC GTGCAGAAAA CTCTAATACC
AGTCGTCACC TAGCTGAATT CTGGATGGTT GAGCCTGAAG TTGCATTCGC AGATCTTGAC
GATGTAGCAG GCCTAGCTGA GCAGATGCTT AAATTCTGCT TTAAAGCAGT ACTTGAAGAG
CGTCGCGACG ATCTTGAGTT TTTCGCACAA CGTGTTGATA AAACAGTTAT CGAACGTTTA
GAGTCATTTG TTAACAGTGA TTTTGCTCAG GTCGACTACA CTGATGCGGT TGAGATTTTA
AAGAACTGCG GCAAAAAGTT TGAATACGAT GTTGAGTGGG GAATTGATTT ACAATCAGAG
CATGAACGCT ACCTTGCTGA AGAGCATTTT AAAGCGCCTG TTGTGGTTAA GAACTACCCG
AAAGACATTA AAGCTTTCTA TATGCGACTC AATGAAGATG GTAAAACCGT TGCAGCAATG
GACGTACTTG CTCCAGGCAT TGGTGAAATT ATCGGTGGTG CCCAACGTGA AGAGCGTTTA
GAGGTTCTTG ATGCTCGTCT CGAAGAGATG AATCTAAGCA AAGAGGATTA CTGGTGGTAC
AGAGACATGC GCCGTTACGG CACAGTACCA CATTCAGGAT TCGGCCTAGG TTTCGAGCGC
TTGGTATCTT ATGTGACGGG TGTATCCAAC ATCCGTGATG TGATCCCTTT CCCTCGCGCA
CCAAAGTCAG CAAGCTTCTA A
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| Protein sequence | MSITSVASVF KGDFAIGSQV TVRGWVRSRR DSKAGISFLA VYDGSCFDPI QGVVPNSLAN
YNDEILKLTA GCSVVMTGEV VDSPGKGQAF ELQVTQVEVA GWVEDPDTYP MAAKRHSIEH
LRELAHLRPR TNIIGAVARV RNSLSQAIHR FYNEEGFIWV STPLITASDC EGAGEMFRVS
TLDMENLPRT DEGKVDYSED FFGKESFLTV SGQLNAETYA SALSKVYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFADLD DVAGLAEQML KFCFKAVLEE RRDDLEFFAQ RVDKTVIERL
ESFVNSDFAQ VDYTDAVEIL KNCGKKFEYD VEWGIDLQSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGAQREERL EVLDARLEEM NLSKEDYWWY
RDMRRYGTVP HSGFGLGFER LVSYVTGVSN IRDVIPFPRA PKSASF
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