Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2040 |
Symbol | |
ID | 6116303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 2507124 |
End bp | 2508083 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641633543 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_001760419 |
Protein GI | 170726393 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000147656 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0175917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACAA AAATTCTTGG AACTGGTAGT TATTTACCAG CACAAGTGCG TAGCAATCAG GATCTGGAAC AGATGGTTGA AACCAGTGAC CAGTGGATTG TTGAACGCAC AGGTATCTCT GAGCGCCGTA TTGCCGCTTC CGATGAGTCA GTATCGACCA TGGGATTTGA AGCTGCGAAG AAAGCCCTTG AGATGGCAGG CATCGAGGCA AGCGAACTCG ATATGATCGT GTGCGGAACG ACGAGTGCAA GTAATGCATT TCCGGCTGCC GCGTGCGAGA TTCAAGCTAT GCTGGGGGTC CACACGATCC CAGCTTTTGA TATCGCAGCA GCTTGCTCAG GTTTTGTTTA TGCACTCTCG ATTGCAGACC AGTATGTCAA ATCTGGTATG GCTAAAAAGG TGCTAGTGAT AGGCGCAGAC GTGTTATCAC GCCTTTGTGA GCCAGAAGAT CGCGGTACTA TTATTCTATT TGGTGATGGT GCGGGTGCGG CTGTAATTGG TGCTTCTGAT GAGCCAGGTA TTCTATCTAC TCATATTTAT GCCGACGGTA GACAAGGCGA TCTACTGAAA TGTTCATTCC CTCCAAGAGC TGGTGAATCA TCTGCTGCGG TTGGTTATAT GACCATGAAA GGTAATGATG TATTTAAGGT TGCGGTAACA CAGCTCTCCC ATGTTGTGAC CGAGACTCTG CGGATTAATC AAATTGATAA GTCTGAGATT GATTGGTTAG TGCCACATCA AGCCAACTTC CGCATTATTA AAGCAACAGC TAAAAAGCTA GGCATGAGTT TAGATAAAGT GGTGCTGACC CTTGCTAAAC ATGGTAATAC TTCTGCTGCT TCTGTTCCAA TAGCCCTTGA TGAGGCTGTT CGTGATGGTC GAATAAAGCG CGGTCAACTC CTAATGTTAG AAGCATTTGG AGCTGGTTTT GCGTGGGGCA GTGCATTAGT TCGTTTTTAA
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Protein sequence | MHTKILGTGS YLPAQVRSNQ DLEQMVETSD QWIVERTGIS ERRIAASDES VSTMGFEAAK KALEMAGIEA SELDMIVCGT TSASNAFPAA ACEIQAMLGV HTIPAFDIAA ACSGFVYALS IADQYVKSGM AKKVLVIGAD VLSRLCEPED RGTIILFGDG AGAAVIGASD EPGILSTHIY ADGRQGDLLK CSFPPRAGES SAAVGYMTMK GNDVFKVAVT QLSHVVTETL RINQIDKSEI DWLVPHQANF RIIKATAKKL GMSLDKVVLT LAKHGNTSAA SVPIALDEAV RDGRIKRGQL LMLEAFGAGF AWGSALVRF
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