| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2039 |
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| Symbol | |
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| ID | 6116302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2506083 |
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| End bp | 2507111 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633542 |
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| Product | putative glycerol-3-phosphate acyltransferase PlsX |
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| Protein accession | YP_001760418 |
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| Protein GI | 170726392 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000241894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0171767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAGATC TGACGCTTGC GTTAGATGTG ATGGGGGGCG ATTATGGCCC CCGCGTCACA
GTGCCTGCAA CTTTGCAGGC ACTTCATTTA TATCCCTCTC TACATGTTGT CCTTGTTGGC
AACCAGCCTG AAATAGAACA TTTTCTTCCT AAGGCTGAAT CCAGTATTCG TCAAAGAATT
GAGATCCTTC ATACGACTGA AGTCGTCAGT ATGTCAGATC GCCCTGTCCA TGCACTTAGA
AATAGAAAGC AAAGCTCAAT GCGCTTGGCT ATTGAACTGG TGCGTGACGG TAAAGCTCAA
GCTTGCTTAA GTGCAGGAAA TACTGGTGCA CTGATGGCGA TAGCTAAAGT GCTACTTAAG
ACATTACCCG GTATTGATAG ACCAGCTTTG GTAAGTTGTT TACCTGCGGT TAATCAAAAG
CCTGTGTACT TACTTGATCT TGGCGCTAAT GTCTCTTGTT GCAGCGAAAC ACTATTCCAG
TTTGCAGTAA TGGGATCTGT GCTCAGTGAA GCTGTCGATA AGAATGAGCA ACCTAAAGTT
GCACTTTTAA ACGTTGGCAT CGAAGAGATT AAAGGTAACG ATCAAGTTCA ACAGGCAGGA
CAACTATTAC AACAAAGTCC GCAAATTAAC TATGTGGGCT TTATTGAAGG TAATGATCTT
TACTCTGGCA ATGTTGATGT CATTGTTTGT GATGGTTTTG TTGGTAATAT CACATTGAAA
ACCTCTGAAG GAATCGCAAA ATTGTTGGTC AATCAGTTGG AAAAAGGACT GACCAAAGGT
TTTTTTGTGC GATTAATGGC CAAACTAATC GCTCCCCGCA TAAATTCTGT TCTTAAACAG
ATGAACCCCG ACCACTACAA TGGTGCAAGT TTGATAGGAT TGCGCGGAAT TGTAGTAAAA
AGTCATGGCA GTGCCGATGA ATCTGCTTAT TTGCAAGCGA TAACCCTTGC AGTGACAGAG
GCGCAACGTA GACTCCCAAA GATGATTGAA GAACGTCTTG AGTCGATTCT TTTAGATATT
AATAACTGA
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| Protein sequence | MTDLTLALDV MGGDYGPRVT VPATLQALHL YPSLHVVLVG NQPEIEHFLP KAESSIRQRI
EILHTTEVVS MSDRPVHALR NRKQSSMRLA IELVRDGKAQ ACLSAGNTGA LMAIAKVLLK
TLPGIDRPAL VSCLPAVNQK PVYLLDLGAN VSCCSETLFQ FAVMGSVLSE AVDKNEQPKV
ALLNVGIEEI KGNDQVQQAG QLLQQSPQIN YVGFIEGNDL YSGNVDVIVC DGFVGNITLK
TSEGIAKLLV NQLEKGLTKG FFVRLMAKLI APRINSVLKQ MNPDHYNGAS LIGLRGIVVK
SHGSADESAY LQAITLAVTE AQRRLPKMIE ERLESILLDI NN
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