| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1649 |
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| Symbol | |
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| ID | 6115890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2041269 |
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| End bp | 2042741 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633132 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001760030 |
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| Protein GI | 170726004 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000051541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCCCA AGGGACGATG CTCGGGCATC CGAAGGGATT GTTCCTGTTG
TTTACAACAG AGTTATGGGA ACGATTCAGC TATTACGCAA TGCGTGCCAT TTTGGTACTT
TATTTGGTAG ATAGTGTTCA ATCACAAGGT GGTCATGGTT TAGGTTGGAC TAGCGCTGAC
GCCCTCTCTC TTTACGGTAC ATTCACAGGT TTAGTCTATT TAACACCACT TATCGGTGGC
TGGTTAGCTG ATACATATTT AGGCCAACGT CGTGCCATTA TCATTGGTGG TGCCTTAATG
GCCGCAGGCC AATTCATTTT AGGTACACCC CATGCTTGGG TACCAGGAAT GGAAACTGAA
GTTTTCTACC TAGGTCTTGG TGTACTTATT TTAGGTAATG GTCTATTTAA GCCAAATATC
TCAACCATGG TTGGTGATCT TTATGAAGAG GGCGACCACC GTCGTGACGG TGCTTTTACT
ATCTTCTACA TGGGTATCAA CGTTGGTGCA TTCCTTTCAG GTATTATTGT TGGTTCTGTT
GTAGCTTACT TCGACGGTAA CTTCCAAGCA GGCTTCATCT GTGCCGGTAT TGGTATGGTT
CTATCATTAA TTATTCAGTT CATGTTTGCT CAAAAGCTAC TTGGTGATAT TGGTCGTAGA
CCAGCTGCAC AACTTGAAAA AGAGAAAGCT GCTGAAAAAG GTGAAGTACG TAAAGAGCCT
CTGACAAAAG TTGAACGTGA CCGTATCAAA GTTATTATGA TCATGGGTCT ATTCACCATC
ATCTTCTGGG CTGGCTTTGA ACAGGCTGGC GGTCTAATGA ACCTGTTCAC CAATGACTTC
ACAGACAGAA GCATAGGCAG TTGGGAAGTT CCTACGACTT GGTTCCAATC ACTGAATGCG
ATGTTTATCG TTATTTTTGC ACCAGTTGTG GCTTCAATTT GGATCCGCTT AGGTAAGAAT
GAGCCAAACT CGCCAGTGAA ATTTGCTTTA GGTCTTGTTC TGCTGGGTAT CGGCTTCCTA
TTTATGATTG GTGCAGTACT TGAAATGGGC GGCGATGCCA ATGCTAAATC AAGCATGTGG
TGGTTAGTCG GTGCCTACTT CTTCCATACC ATGGGTGAAC TTTGTCTATC TCCAATTGGT
CTTTCAATGG TGACTAAACT TGCTCCGCTA CGTATCGCAT CACTAATGAT GGGTGCCTGG
TTCCTATTCG TTGCTGCAGC GAATAAGATT GGTGGTGTTG TAGGTTCATT TATCGGTCAC
GGTGGTCCAA AAGAGGAGCA ACTTGCCAAT GCAATGTCTA TCTTCGCAGG TATTGCAATT
ACCGCAGCAG CTTCTGGTAT CCTACTTTAC TTTATGGCTG ATAAATTAGT CGACTGGATG
CACGGTGCTG AAGACGGCCC TGTACACACA GAAGAAGAAG CGCTTGAAGA AGAGATGGCT
GTGACTGCAG AGCATGAAGG TATAAAGCAC TAA
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| Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVL YLVDSVQSQG GHGLGWTSAD
ALSLYGTFTG LVYLTPLIGG WLADTYLGQR RAIIIGGALM AAGQFILGTP HAWVPGMETE
VFYLGLGVLI LGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINVGA FLSGIIVGSV
VAYFDGNFQA GFICAGIGMV LSLIIQFMFA QKLLGDIGRR PAAQLEKEKA AEKGEVRKEP
LTKVERDRIK VIMIMGLFTI IFWAGFEQAG GLMNLFTNDF TDRSIGSWEV PTTWFQSLNA
MFIVIFAPVV ASIWIRLGKN EPNSPVKFAL GLVLLGIGFL FMIGAVLEMG GDANAKSSMW
WLVGAYFFHT MGELCLSPIG LSMVTKLAPL RIASLMMGAW FLFVAAANKI GGVVGSFIGH
GGPKEEQLAN AMSIFAGIAI TAAASGILLY FMADKLVDWM HGAEDGPVHT EEEALEEEMA
VTAEHEGIKH
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