| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1387 |
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| Symbol | |
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| ID | 6115627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1742228 |
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| End bp | 1743187 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632875 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_001759774 |
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| Protein GI | 170725748 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0324994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000216996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGAAAGAAT TTCAATTAAT CGAACACTTT TTTGCCAAGC AAGCTCAGTC ACGCCGTGAC
GTTGAGCTAG GTATTGGTGA CGACTGTGCT TTAGTGACAC CCGCACTCAA TAAATCCATC
GCAATCTCCT GTGACACCTT AGTCGAGAAT GTTCACTTCT ATCCCGATAT TCCTCCAAAA
GCCTTAGGTT ATAAATCACT GGCGGTTAAT CTGTCTGATC TTGCTTCTAT GGGCGCAGAG
CCTGCTTGGA TGACGTTAGC GCTGACATTG CCAGAAGTGG ATGAGCAGTG GTTAACCAGT
TACAGTGCTG GTCTATTTGA AGCTGCTGAG TATTACAATA TTGCCCTTGT TGGCGGTGAC
ACAACTCTTG GGCCGCGCTC CATCACAATT ACAGTTAATG GGCAGGTACA AGCGGGCACA
GGTTTAACAC GAAGTGGTGC CAGAATTGGT GATTGGATCT ACGTCACTGG CACGCTAGGC
GATTCGGCTT TGGGGCTAGA TCTTATTCGT GGTAACAGGG CGTCGAGTCC TGAAGATGCA
GATTTTTTGA TTAATCGTCA CTACTACCCA ACGCCACGAG TACTTGCAGG TCAAGCCCTT
CGTACGCTGG CTTCAAGTGC TATCGATCTT TCCGATGGGT TACTGAGCGA TATTCAGCAT
CTACTAAAAC AGTCTGGTAT TGGAGCCACT ATCGATGTGG ATCTCTTGCC ACTGTCTGCT
TCTCTTAAAA ACTCTGTAAC AGAGGAGGAA GCACTGAGTT ATGCATTAAC GGGGGGGGAA
GATTATGAGC TGCTCTTTAG TGTTCCAGAA GCACAAAAAG GGGCACTTGA AATAGCTCTC
GCAAATACCG GTGTTTCATT TGCTCAGATA GGCCAGATAA GCACAGGTGA TAAGTTGAAA
CTACTTCGTG ATGGTCAGCC TTACACCCCT ATTAATATTG GATTTGAACA TTTTTCCTGA
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| Protein sequence | MKEFQLIEHF FAKQAQSRRD VELGIGDDCA LVTPALNKSI AISCDTLVEN VHFYPDIPPK
ALGYKSLAVN LSDLASMGAE PAWMTLALTL PEVDEQWLTS YSAGLFEAAE YYNIALVGGD
TTLGPRSITI TVNGQVQAGT GLTRSGARIG DWIYVTGTLG DSALGLDLIR GNRASSPEDA
DFLINRHYYP TPRVLAGQAL RTLASSAIDL SDGLLSDIQH LLKQSGIGAT IDVDLLPLSA
SLKNSVTEEE ALSYALTGGE DYELLFSVPE AQKGALEIAL ANTGVSFAQI GQISTGDKLK
LLRDGQPYTP INIGFEHFS
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