| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1255 |
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| Symbol | rimM |
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| ID | 6115490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1593257 |
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| End bp | 1593787 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632738 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001759642 |
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| Protein GI | 170725616 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000136012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000512506 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGTA AACAAGAACC TGTCGTACTG GGTAAAATAG GCTCCAGTCA TGGCATTAAG
GGTTGGTTGA AGATCACTAC CTATACCGAA TCTGTTGAAG GTATTTTTGA TTATTCACCT
TGGTTGATTA AAGAGCAGGG TGAGTGGCGC GAAGTAAAAG TTACCCAGTG GCGTTTTCAG
GGTAAAGCTG TAGTGGCTTC TCTTGAAGGC GTAGAAACAC GGGATCAGGC ACAGATGCTC
ACAAATTGTG AGATCGCCGT GTCTGCAGAG CAGATGCAGG AACTACCAGA AGATGAATTC
TACTGGCGTG ACCTCATCGG TTGTGAAGTA ACCAATACCA AAGGCTATAA CATGGGTAAG
GTTCAGGAGA TCGTGGAAAC AGGATCGAAT GATGTACTAC TTGTTAAAGC TAACGCCAAA
GATGGCTTCG GCAAAGCGGA ACGTATGATC CCCTTTGTCA CCGAGCAGTT CGTCCTAGAG
GTGAACTTAA CGGAGAAACA GATCTTAGTG GATTGGGATC CGGACTTTTA A
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| Protein sequence | MSSKQEPVVL GKIGSSHGIK GWLKITTYTE SVEGIFDYSP WLIKEQGEWR EVKVTQWRFQ
GKAVVASLEG VETRDQAQML TNCEIAVSAE QMQELPEDEF YWRDLIGCEV TNTKGYNMGK
VQEIVETGSN DVLLVKANAK DGFGKAERMI PFVTEQFVLE VNLTEKQILV DWDPDF
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