| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1253 |
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| Symbol | |
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| ID | 6115488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1591417 |
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| End bp | 1592790 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632736 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001759640 |
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| Protein GI | 170725614 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000049947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000752283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGAGA ACCTAACGGA CAGACTGTCA CGTTCACTAA AGAATATTAG TGGCCGTGGT
CGCTTAACAG AAGATAATGT TAAGGAAACC TTACGAGAAG TGCGCATGGC ACTACTCGAA
GCTGATGTGG CTCTACCTGT TGTACGTGAT TTTGTTAACA GCGTAAAAGA GCGTGCGGTA
GGGCAGGAAG TTTCTAAGAG TCTCAGTCCA GGCCAAGCAT TTATTAAGAT AGTCCAGAGC
GAACTTGAAA ACGCGATGGG TGAAGCCAAT GAAGCGTTAG ACCTTTCGGC TCAGCCTCCT
GCTGTGATCA TGATGGCCGG TCTTCAAGGT GCGGGTAAAA CTACCAGTGT CGCGAAACTA
TCTAAGTTCC TACGTGAGCG TGAAAAGAAA TCAGTTTTAG TTGTCAGCGC CGACGTCTAT
CGTCCAGCCG CGATTAAACA GCTAGAAACC TTGGCGACTG AAGTTGAAGT TGAGTTCTTC
CCATCGGATG TCAGTCAAAA GCCTATCGAC ATTGTTAATG CTGCAATGGC CCATGCCAAA
TTGAAGTTTA TCGATGTGGT CATTGTCGAT ACCGCAGGTC GTCTGCATGT CGATGAGAGC
ATGATGGATG AGATCAAGGC ACTTCATGCT GCGGTCAATC CAGTAGAGAC TCTGTTTGTT
GTCGACGCTA TGACGGGTCA AGATGCGGCA AATACAGCTA AAGCATTCAA TGAAGCGCTG
CCTTTGACTG GTGTGGTATT GACCAAGGTC GATGGTGATG CACGTGGTGG TGCTGCTTTA
TCTATCCGTC ATATTACCGG TAAGCCGATT AAGTTCTTAG GTGTGGGTGA GAAGACCGAC
GCATTGGAGC CATTCTATCC TGATCGCGTC GCATCACGCA TCTTAGGCAT GGGTGATGTA
CTGTCACTGA TTGAAGAGGT TGAGCGCGGC GTCGATAAAG ACAAGGCGAT GAAGCTGGCT
TCGAAAGTGA AGAAAGGCGG CAGTTTCGAT CTTGAAGATT TCCGTGAACA GCTTCAGCAG
ATGAAGAACA TGGGCGGCAT GATGGGCATG ATTGAAAAGC TTCCTGGTGT TGGTCAATTA
CCGCCAGAAG CATTAGCTCA AGTTCAAAAT GGCAAGATGA CTAACCAGAT GGAAGCGATC
ATCAACTCCA TGACTAAAGG TGAGCGTGCT CGCCCAGATA TCATCAAAGG GTCGCGTAAG
CGCCGTATCG CTCAGGGTTC TGGTACACAA ATTCAGGACG TAAACCGCTT GTTGAAGCAG
TTTACTCAGA TGCAGAAGAT GATGAAAAAG ATGTCGGGTA AAGGCGGCAT GAAAAAGATG
ATGCGTGGCA TGAGCGGTAT GTTGCCACCA GGCATGAAGA TGCCAGGCCG TTAA
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| Protein sequence | MFENLTDRLS RSLKNISGRG RLTEDNVKET LREVRMALLE ADVALPVVRD FVNSVKERAV
GQEVSKSLSP GQAFIKIVQS ELENAMGEAN EALDLSAQPP AVIMMAGLQG AGKTTSVAKL
SKFLREREKK SVLVVSADVY RPAAIKQLET LATEVEVEFF PSDVSQKPID IVNAAMAHAK
LKFIDVVIVD TAGRLHVDES MMDEIKALHA AVNPVETLFV VDAMTGQDAA NTAKAFNEAL
PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFYPDRV ASRILGMGDV
LSLIEEVERG VDKDKAMKLA SKVKKGGSFD LEDFREQLQQ MKNMGGMMGM IEKLPGVGQL
PPEALAQVQN GKMTNQMEAI INSMTKGERA RPDIIKGSRK RRIAQGSGTQ IQDVNRLLKQ
FTQMQKMMKK MSGKGGMKKM MRGMSGMLPP GMKMPGR
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