| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1004 |
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| Symbol | rplU |
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| ID | 6115238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1315938 |
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| End bp | 1316249 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632487 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001759392 |
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| Protein GI | 170725366 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000156676 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000356458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTACGCTG TTTTTCAAAG TGGTGGTAAG CAACATCGTG TTGCCGAAGG CCATACTGTT
CGTTTAGAGA AATTAGAAGT CGCTACAGGC GAAACTGTTG AATTTGACCA AGTTCTTTTG
GTTGCAGACG GTGAGACTGT ACATGTTGGT GCACCTTTAG TTGAAGGTGG TAAGGTTGTT
GCTGAAGTTG TTAGCCACGG CCGTGACGAG AAGGTAACTA TTGTTAAGTT CCGTCGTCGT
AAGCACCACG ACAAGAAAAT GGGCCACCGT CAGTGGTTCA CCGAAGTTAA AATTACAGCT
ATCAACGCTT AA
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| Protein sequence | MYAVFQSGGK QHRVAEGHTV RLEKLEVATG ETVEFDQVLL VADGETVHVG APLVEGGKVV
AEVVSHGRDE KVTIVKFRRR KHHDKKMGHR QWFTEVKITA INA
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