Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0714 |
Symbol | |
ID | 6114948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 978459 |
End bp | 981638 |
Gene Length | 3180 bp |
Protein Length | 1059 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641632199 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001759104 |
Protein GI | 170725078 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000141926 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000428455 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTCAAAG CGAGTGAAGT TCTGATGGGT CACTATGACT CAACAAGCCT CGATGAGCTT TTTAAAGCCA TCACCAATAA CTATATTGTC GATGAAGAGC AGTATCTTTC TGAACTCATC AAACTTGTAC CATCAAGTGA TGAGGAGATT AAGCGCGTCA CTGATCGCGC CCACGATATG GTTAAAAAGG TGCGTCAATA CGATAAAAAA GGCCTGATGG TCGGTATTGA TGCCTTCTTG CAACAATATA GCTTAGAGAC GCAGGAGGGT ATTATCCTGA TGTGTCTTGC AGAAGCACTC CTACGTATTC CAGACTCGGC CACCGCCGAT GCACTGATAG AAGACAAACT ATCTGGTGCG AAATGGGACG CTCATATCAG CAAGAGTGAT TCACTTTTGG TTAACGCATC GACTTGGGGG CTAATGCTCA CAGGAAAGAT CGTTAAACTC GATCACAATG TTGACGGTAA GCCAAGCAGC TTGCTCAACA AACTTGTTAA TCGCATGGGC GAACCTGTTA TCCGCCAAGC AATGCTTGCG GCGATGAAGA TAATGGGTAA GCAGTTTGTA CTCGGACGCA CAGTTAAAGA GGCACTTAAA AACAGTGTCG ATAAGCGAAA GCTTGGCTAT ACCCACAGCT ATGACATGCT GGGTGAAGCA GCACTGACGA AAAAAGACGC CGAGCAGTAT TTTAAAGATT ACTCTAGCGC TATCGCCTCA TTAGGTGAGC AGAGCTATGA TGAGTCTGAA GCCCCTCGTC CAACGATCTC AATTAAGCTC TCAGCGCTTC ACCCACGTTA TGAAGTCGCC AATGAGGATA GAACGTTAAC TGAGCTATAC GACACGCTAG TTAAACTGAT CCAGCAGGCC CGTAGTGTCA ATGTTGGGAT CTCTATCGAC GCTGAAGAGA TGGATAGACT TGAGCTATCT CTAAAGCTGT TCCAGAAGCT ATATAACTCA CAAGCAGCAA AAGGCTGGGG TGTGCTTGGC ATTGTTGTTC AGGCATACTC AAAACGTGCG CTGCCAGTGC TGTGTTGGTT AACTCGCCTA TCTAAAGATC AAGGCGATGA GATCCCAGTA CGCCTAGTTA AAGGCGCCTA TTGGGACAGC GAGCTTAAGT GGGGACAGGA AAACGGCGAA GGTGGTTACC CACTTTTCAC TCGTAAAGCC AGCACTGATC TCTCCTACTT AGCCTGCGCC CGATATCTAC TGAGCGATGC AACACGTGGT GCCATCTATC CACAGTTTGC CAGCCACAAC GCGCAAACCG TGGCATCAAT CACGCATATG GCAGGTGATA GAAACTATGA GTTCCAACGT CTACATGGAA TGGGTGAAGA GCTCTACGAT ACCCTGCTTG CTGAGGGTGG TGTAAAGGCA GTACGCATCT ATGCTCCGGT GGGTGCCCAT AAAGATCTGC TTCCCTATTT GGTTCGTCGC CTGCTTGAAA ACGGAGCAAA CACCTCCTTC GTTCATAAGT TAGTAGACCC TAAAACCCCT ATTGAATCAC TAGTGATCCA CCCACTGGTC ACGCTACAAA AATACAAAAC CCTGGCTAAC AATAAAATCG TATTGCCTGC CGATATCTTC GGTGAAGAGC GTCAAAATTC CAAGGGACTC AACATGAACA TCATCTCAGA ATCTGAGCCA TTCTTCGCTG CACTAGATAA GTTTAAAGAC ACCAACTGGA GCGCAGGCCC ACTGGTTAAT GGTGAGCTAT TAACTGGTGA AACACATGAA GTCGTTAGCC CGTTCGACAC CAGCAAAGTC GTAGGTAAGT TAGCCTTTGC TAACAACCAA GCGATCGAGC AAGCACTCTC TGGCGCCGAT GGCGCTTTTA GCAGCTGGTG TAACACCCCT GTAGAAACCC GAGCTAATGC ACTGCAAAAA CTTGCCGACC TGCTTGAAGA GAACCGTGAG GAGCTTATCG CCCTTTGTAC TCGAGAGGCG GGTAAGAGCA TTCAAGACGG CATTGATGAA GTTCGTGAAG CGGTTGATTT TTGTCGCTAC TACGCCGTAC AAGCGAAGAA GATGATGGCG CAACCTGAGC TGCTTCCAGG TCCAACAGGC GAGCTCAATG AGCTATTCCT CCAAGGCCGA GGTATCTTTG TTTGTATCAG CCCATGGAAC TTCCCATTGG CTATCTTTAT CGGTCAAGTC GCTGCCGCCC TTGCAGCGGG TAACACTGTT GTTGCTAAGC CTGCTGAGCA GACCTCTATT GTCGGTTTCC GAGCGGTGCA GCTTGCTCAT CAAGCTGGTA TCCCTAAAGA GGTGTTACAG TTCCTTCCAG GCACTGGTGC GACTGTTGGG GCAGCCATCA CCTCTGATGA GCGTATCGGC GGTGTCTGTT TCACTGGCTC CACTGGTACG GCTAAGCTAA TTAACCGCAC TTTGGCAAAT CGTGAAGGGG CTATTATTCC ACTTATCGCA GAGACAGGTG GTCAAAATGC GATGGTGGTT GACTCAACAT CACAACCAGA GCAAGTGGTT AACGATGTGG TCTCCTCATC ATTCACCAGT GCAGGACAGC GCTGCTCAGC ACTTCGTGTC CTCTTCCTAC AGGAAGATAT TGCCGACCGT GTGCTTGATG TAATGCAAGG CGCAATGGAG GAGCTGACAA TAGGTGACCC AAGCTTTGTT AAAACAGACG TAGGGCCAGT TATCGATGCA ACTGCTCAGG CTAACCTCAA TGCCCATATC GACCATATCA AGCAGGTGGG TACTTTGCTG AAACAGCTAG AGCTACCAGC AGGTACAGAG AAGGGGCACT TCGTTGCGCC GACTGCGGTA GAGATAGACT CTATCAAGGT GCTTGAGAAG GAGCACTTCG GTCCAATCCT ACATGTCATT CGCTACAAGG CAGCCGATCT TAATAAGGTG ATCGATGAGA TCAACTCAAC AGGATTTGGT CTGACATTAG GGATCCACAG CCGTAACGAA GGCCACGCCC TTAAAGTTGC TGGTAAAGTT AATGTAGGTA ATGTCTACAT TAACCGTAAT CAGATTGGCG CAGTGGTTGG CGTACAGCCA TTTGGCGGAC AGGGACTCTC AGGTACAGGC CCTAAAGCGG GTGGTCCTCA CTACCTGACT CGTTTCGTGA CAGAGAAGAC TCGCACCAAT AACATCACCG CGATTGGCGG TAATGCAACT CTACTCTCTC TAGGTGATAG CGACGAGTAA
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Protein sequence | MFKASEVLMG HYDSTSLDEL FKAITNNYIV DEEQYLSELI KLVPSSDEEI KRVTDRAHDM VKKVRQYDKK GLMVGIDAFL QQYSLETQEG IILMCLAEAL LRIPDSATAD ALIEDKLSGA KWDAHISKSD SLLVNASTWG LMLTGKIVKL DHNVDGKPSS LLNKLVNRMG EPVIRQAMLA AMKIMGKQFV LGRTVKEALK NSVDKRKLGY THSYDMLGEA ALTKKDAEQY FKDYSSAIAS LGEQSYDESE APRPTISIKL SALHPRYEVA NEDRTLTELY DTLVKLIQQA RSVNVGISID AEEMDRLELS LKLFQKLYNS QAAKGWGVLG IVVQAYSKRA LPVLCWLTRL SKDQGDEIPV RLVKGAYWDS ELKWGQENGE GGYPLFTRKA STDLSYLACA RYLLSDATRG AIYPQFASHN AQTVASITHM AGDRNYEFQR LHGMGEELYD TLLAEGGVKA VRIYAPVGAH KDLLPYLVRR LLENGANTSF VHKLVDPKTP IESLVIHPLV TLQKYKTLAN NKIVLPADIF GEERQNSKGL NMNIISESEP FFAALDKFKD TNWSAGPLVN GELLTGETHE VVSPFDTSKV VGKLAFANNQ AIEQALSGAD GAFSSWCNTP VETRANALQK LADLLEENRE ELIALCTREA GKSIQDGIDE VREAVDFCRY YAVQAKKMMA QPELLPGPTG ELNELFLQGR GIFVCISPWN FPLAIFIGQV AAALAAGNTV VAKPAEQTSI VGFRAVQLAH QAGIPKEVLQ FLPGTGATVG AAITSDERIG GVCFTGSTGT AKLINRTLAN REGAIIPLIA ETGGQNAMVV DSTSQPEQVV NDVVSSSFTS AGQRCSALRV LFLQEDIADR VLDVMQGAME ELTIGDPSFV KTDVGPVIDA TAQANLNAHI DHIKQVGTLL KQLELPAGTE KGHFVAPTAV EIDSIKVLEK EHFGPILHVI RYKAADLNKV IDEINSTGFG LTLGIHSRNE GHALKVAGKV NVGNVYINRN QIGAVVGVQP FGGQGLSGTG PKAGGPHYLT RFVTEKTRTN NITAIGGNAT LLSLGDSDE
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