Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0641 |
Symbol | |
ID | 6114875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 888644 |
End bp | 889039 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632127 |
Product | curli production assembly/transport component CsgE, putative |
Protein accession | YP_001759032 |
Protein GI | 170725006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000725097 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000149917 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAAAGT GGGTCTATTT ATTACTGTTT CTCTTTACCT TCCCTACGGC TGCAGTTGCG GTGGAGGATG ACATTGAGAT TAGTGGTTTG GTGATAGATA GAACCTTGAC TCGTTTTGGT AAAGACTTTG GTTTTTACTA CTCAGGTTAT TGGCGAGATC TCACCTTCAC CCAAGGCTTC AATGTCACTC TATATGAAAC GGTATTCCCA CAAGCAGGCA CTCAGTTGAC TTTAGAGGTG AATGGAAAAG CTATCTATAG AACCCACTTT GGACGTCGGG CAAACCCGGT AAAGGAGCGG GCAGAGCAAG CAATTTTGCT TACCATAGAT CATATAGCCC AGATCAAGGC GAACGCTGTT ACTGGTGAGC TGGCAAGTGC TGAAGATGGC TACTAA
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Protein sequence | MKKWVYLLLF LFTFPTAAVA VEDDIEISGL VIDRTLTRFG KDFGFYYSGY WRDLTFTQGF NVTLYETVFP QAGTQLTLEV NGKAIYRTHF GRRANPVKER AEQAILLTID HIAQIKANAV TGELASAEDG Y
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