Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0280 |
Symbol | |
ID | 6114503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 339630 |
End bp | 341009 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641631761 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001758676 |
Protein GI | 170724650 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000534801 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000336351 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGGCTTCCA TAATATCGCC GGACAAGATC CCTAATAGAA TATTCATCAA GCTGCTGCTT GGCTTCTGGC TCTGCAGCTC TATTATCATC GCGACGGTAG GACTGCTACC TTTATTACAG CAAAATCACG ACCGAGCACC GCTTCCCCCC CACTTAGAGA AGCTGCTCTC TAAATTTGCA GATCGAATTA GCAACCAGCC TCAGTTACTC GAAGCTGGAA AACTTAGCCG CCTAACACAT CGCCGCAACT TTAAAGGCAA GCCTGTTCGT CTCTATTTGG TCAACGATCA AGGTAGGGTG ATCAATACGG ACAAAGTTTC TCGCGGAATG CGCCGCTTTA TGCTGATGGC AGAAGAGGCT AACCAACCTA TCAGCCATCA GTTCAAGAAT GAGCTATTAT TTGGCCCTTA CAACTTTGAT GTTACTGGTA AGCAATACTC TCTCTATGGG CGCTTTGCCG ATCACCACCC AAGGCCTTGG TTTTTCTTCT TAGCCGAAAA TAAATTACTG ACATTGAGCC TAGCGATCGC TCTATCTGGA CTACTTTGTG GCCTACTTGC TTGGCACTTA GGCAAACCAC TACGAACGCT GAGATTAAGT GCAGACTCAT TAGCCGCTGG TGATTTAACA AATCGTGTCG ATGATGCAAC AACTCAACGT AAAGATGAAA TAGGGCTACT TGCTCAAGCT TTTAATGGCA TGGCAGACTC TGTTGAAAAT ATGGTTAACA GTCAACAAAG GCTGATAAGT GACATCTCAC ACGAACTTAG AACGCCATTA ACACGGTTAC AGCTCGCCCT AGCACTCGCT CGAAAAAAGG GAGTTGATAC AGCAGAGACT CAACGTATCG GTTATGAAGC TGAGCAGTTG GAGTTGATGA TTGCCGAGCT GTTAGAGCTC TCTCGGGTAA AGCTCAATAG GCACGATATT AAACACCTAG TTTCACTCAA TGAAACCTTA AATCAGGTGC TAGATGATGC AGATTTCGAG GCATCTCAAC AGGGAAAGCG GCTGGTCATC GATATTGATG ATGCGATAAC ACTGCCCACA AACCCTAGGC CTCTTGCGAG GGCGATAGAG AACTTACTAA GAAATGCCAT TAGCTATGCA GAGATGGAGA TTAATATTAT CGCCCAAGCG GCAGGTAACC AAATTATCAT AACGATTAGC GATGATGGTC CTGGCATCGA GAATAAGCAA GATCTACACG AGATTTTCAA ACCTTTCTAC CGACCTCAAA GTGCCCGTGA ACGAGAATCA GGTGGTTGGG GGCTCGGCTT AGCCATAGCC AAGGCTGCAA TCGATGCTCA CCAAGGCGAG ATCACGGCTC AAAATCGTGC CTCTCAAGGG TTAGAGATCA TCATTAAGCT GCCGAGTTGA
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Protein sequence | MASIISPDKI PNRIFIKLLL GFWLCSSIII ATVGLLPLLQ QNHDRAPLPP HLEKLLSKFA DRISNQPQLL EAGKLSRLTH RRNFKGKPVR LYLVNDQGRV INTDKVSRGM RRFMLMAEEA NQPISHQFKN ELLFGPYNFD VTGKQYSLYG RFADHHPRPW FFFLAENKLL TLSLAIALSG LLCGLLAWHL GKPLRTLRLS ADSLAAGDLT NRVDDATTQR KDEIGLLAQA FNGMADSVEN MVNSQQRLIS DISHELRTPL TRLQLALALA RKKGVDTAET QRIGYEAEQL ELMIAELLEL SRVKLNRHDI KHLVSLNETL NQVLDDADFE ASQQGKRLVI DIDDAITLPT NPRPLARAIE NLLRNAISYA EMEINIIAQA AGNQIIITIS DDGPGIENKQ DLHEIFKPFY RPQSARERES GGWGLGLAIA KAAIDAHQGE ITAQNRASQG LEIIIKLPS
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