Gene Swoo_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0013 
SymbolglyQ 
ID6114230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp17654 
End bp18517 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content48% 
IMG OID641631488 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_001758409 
Protein GI170724383 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000247076 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTGC AGGAATACTG GGCGCAGCAA GGTTGCGCTA TCGTTCAACC TCTGGACATG 
GAGGTTGGTG CTGGTACATT CCACCCACAA ACTTTCCTAC GTTCATTAGG TCCTGAGCCA
ATGAGCAGTG CTTATGTACA GCCATGTCGA CGCCCTACTG ATGGTCGCTA CGGTGAAAAC
CCAAATCGCC TTCAGCACTA TTACCAGTAT CAGGTCGTTC TAAAACCTTC ACCAAGCAAT
ATTCAAGAGC TCTACCTAGG CTCACTTGAA GCCCTTGGCG TCGATATGAA CGTCCATGAT
GTCCGCTTCG TAGAAGATAA CTGGGAGTCA CCAACACTGG GCGCTTGGGG CCTAGGATGG
GAAGTCTGGT TAAATGGCAT GGAAGTGTCA CAGTTCACCT ATTTTCAACA GGTTGGCGGA
CTTGAATGTA GCCCAGTAAC CGGTGAGATC ACTTACGGTC TTGAGCGTCT GGCTATGTAT
ATTCAGGAAG TAGACAGTGT TTACGACCTA GTGTGGACCG ATGGCCCTAT GGGCAAAGTA
ATGTATGGTG ATATCTTCCA CCAAAATGAA GTTGAGCAAT CAACCTATAA CTTCGAACAT
GCTAACGTCG ATGTACTATT TAAGATGTTT GATGACTGTG AAGTCGCTTG TCAGCGTCTG
TTGACCTTAG AGAAGCCACT TCCACTACCA GCCTATGAGC AGGTAATGAA AGCATCCCAT
GCATTTAACC TGCTAGATGC TCGCCACGCA ATCTCAGTAA CAGAGCGCCA ACGTTATATT
CTCCGCGTTC GTACTATGGC CAAAGGCGTA GCAGAATCCT ATTATCAAGC CCGTGAAGCC
CTTGGCTTCC CAATGTGTAA GTAG
 
Protein sequence
MTLQEYWAQQ GCAIVQPLDM EVGAGTFHPQ TFLRSLGPEP MSSAYVQPCR RPTDGRYGEN 
PNRLQHYYQY QVVLKPSPSN IQELYLGSLE ALGVDMNVHD VRFVEDNWES PTLGAWGLGW
EVWLNGMEVS QFTYFQQVGG LECSPVTGEI TYGLERLAMY IQEVDSVYDL VWTDGPMGKV
MYGDIFHQNE VEQSTYNFEH ANVDVLFKMF DDCEVACQRL LTLEKPLPLP AYEQVMKASH
AFNLLDARHA ISVTERQRYI LRVRTMAKGV AESYYQAREA LGFPMCK