Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0013 |
Symbol | glyQ |
ID | 6114230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 17654 |
End bp | 18517 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631488 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001758409 |
Protein GI | 170724383 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000247076 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCTGC AGGAATACTG GGCGCAGCAA GGTTGCGCTA TCGTTCAACC TCTGGACATG GAGGTTGGTG CTGGTACATT CCACCCACAA ACTTTCCTAC GTTCATTAGG TCCTGAGCCA ATGAGCAGTG CTTATGTACA GCCATGTCGA CGCCCTACTG ATGGTCGCTA CGGTGAAAAC CCAAATCGCC TTCAGCACTA TTACCAGTAT CAGGTCGTTC TAAAACCTTC ACCAAGCAAT ATTCAAGAGC TCTACCTAGG CTCACTTGAA GCCCTTGGCG TCGATATGAA CGTCCATGAT GTCCGCTTCG TAGAAGATAA CTGGGAGTCA CCAACACTGG GCGCTTGGGG CCTAGGATGG GAAGTCTGGT TAAATGGCAT GGAAGTGTCA CAGTTCACCT ATTTTCAACA GGTTGGCGGA CTTGAATGTA GCCCAGTAAC CGGTGAGATC ACTTACGGTC TTGAGCGTCT GGCTATGTAT ATTCAGGAAG TAGACAGTGT TTACGACCTA GTGTGGACCG ATGGCCCTAT GGGCAAAGTA ATGTATGGTG ATATCTTCCA CCAAAATGAA GTTGAGCAAT CAACCTATAA CTTCGAACAT GCTAACGTCG ATGTACTATT TAAGATGTTT GATGACTGTG AAGTCGCTTG TCAGCGTCTG TTGACCTTAG AGAAGCCACT TCCACTACCA GCCTATGAGC AGGTAATGAA AGCATCCCAT GCATTTAACC TGCTAGATGC TCGCCACGCA ATCTCAGTAA CAGAGCGCCA ACGTTATATT CTCCGCGTTC GTACTATGGC CAAAGGCGTA GCAGAATCCT ATTATCAAGC CCGTGAAGCC CTTGGCTTCC CAATGTGTAA GTAG
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Protein sequence | MTLQEYWAQQ GCAIVQPLDM EVGAGTFHPQ TFLRSLGPEP MSSAYVQPCR RPTDGRYGEN PNRLQHYYQY QVVLKPSPSN IQELYLGSLE ALGVDMNVHD VRFVEDNWES PTLGAWGLGW EVWLNGMEVS QFTYFQQVGG LECSPVTGEI TYGLERLAMY IQEVDSVYDL VWTDGPMGKV MYGDIFHQNE VEQSTYNFEH ANVDVLFKMF DDCEVACQRL LTLEKPLPLP AYEQVMKASH AFNLLDARHA ISVTERQRYI LRVRTMAKGV AESYYQAREA LGFPMCK
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