Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1240 |
Symbol | |
ID | 4282155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1431051 |
End bp | 1433762 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638138115 |
Product | hypothetical protein |
Protein accession | YP_753920 |
Protein GI | 114566766 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01116] sarco/endoplasmic reticulum calcium-translocating P-type ATPase [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase [TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA ATACCTGGCA CAGTACAGGC CTGGATGAAA TTTTGCTCTC CCTTAATAGC AAGCAGGAAG AGGGATTAAG TCTTACTGAA GTAAGAAAAC GCCAAAGTAT ATATTCCAAT TCCCTGGAAG ATGATAAAAG GCTTAGTCCT TTGATTATAT TTATAAATCA ATTTACCGAT ACCATGGTAT TGGTTCTTTT AGGGGCTACA GTTATATCAG GCCTTATTGG AGCCATGGCT GATGCCATTA CCATTATGGC TATAGTGGTA ATAAATGCGA CCCTGGGTTT TATCCAGGAG TACCGGGCAG AACGATCCCT GGAGGAAATA AAAAAACTGG CTTCACCTCA TGCTATAGTT TTGCGGGAAG GAAGGCGAGT CAAGCTGCCG GCTTCTGAAC TGGTACCGGG TGATATTGTT TTTTTAGAAA CGGGAGATAA AGTACCTGCT GATCTTCGTT TGTTGGAAAG TTTCAGTCTG GAAATAGATG AAGCGATTTT AACTGGAGAA TCCTTTCCGG TTAAGAAGAA TGCCCTTATC ACTATCCCCG ATCGCACACC CCTGGCCGAA AGAATAAATA TGGCTTTTAT GGGAACCGTT ATAACTCGAG GACGGGCAAG GGCAGTGATA GTCACAACCG GTATGAATAC AGAAGTAGGT CAAATAGCAA AAATGATGAA AGAAACGGAA AGACCATTAA CACCCTTGCA GGTGAGGCTG GACCAGTTGG GGAAAATCCT CATTGTTATT TGCCTGGTGG TTTGTACTTT AGTTAGTCTT TTGGGCATCT ATCGCGGTGA AAATATTATG GTTATGCTTA TGGCAGGAAT AAGTCTGGCC GTTGCTGCTA TTCCTGAAGG CCTTCCGGCA ATTGTAACGG TGGTATTGGC TTTGGGAGTA CAAAAAATGG CCCGAAGAAA TGCCATTATA AGGAAACTAC CAGCAGTTGA GACCCTGGGA TGTACCACGG TGATTTGCTC CGATAAGACT GGCACTTTGA CCCAGAATCA GATGACCGTG GGAAGATTGG CTACTATCGA TACAACAATG GGGATAACAG GAAATGGCTA TGAACCTCGA GGAAGCTTCC AGCAAGAAGC TAATGAGATT AACCCCCTTT CTGCCATAAA CATTCGCCTA ATAATGGAGG TGGCTTTAAA CTGCAATAAT GCTATACTGG AAAAGCGCAA AGATAGTTAT CAGATTCAAG GCGATCCCAC CGAAGCTTCG TTGCTGGTTA TGGCGCAAAA AGCAGGTATG ACCAGGTTAT ATAAGCGTCA AAGAGAAATT CCCTTTGATT CCGCTAGAAA AAAGATGAGT ATAGTAGTGG AAGCAGATGG AGAATACCTG GTTTTTTGCA AGGGTGCCCT GGAAGTCCTT ATACCCTCTT GTAAGCAAAT AATCAAACAG GATCAAACTC AGCCTCTGCG GGAAGAACAC AAAGAGTACT TTTATTTTTT GCAGGAACAA TGGGCGGGAG AAGCCTTAAG GATTCTAGGT TTTGCTGCCA AGAAAATAAA ACCTGCCGAT ATAAATTTGC CGGATGATGC TTTGGAGTCC GGCTTGACTT TATTGGGAAT CTGTGGAATG AGTGACCCGC CACGCCGCGG GGTAGAAAAA TCAGTCGCAG CCTGTTTAAA TGCTGGAATA ACACCGATAA TGATTACCGG GGATCACCCG GTTACTGCCC TGGCTATTGC CAAAAAGATA GGTATTAGCG AGGGCAATGA GGTTCTTACC GGAAGTGATT TAGAACAATT GACTGACCAG GATTTATACC GAAAATCGCT AACAACCAGG GTTTTTGCCC GAGTTGCTCC AGAACACAAA AACCGTATCG TAGAAGTTTT AAAGAAAAAT AAAGAAGTTG TAGCTATGAC CGGTGATGGG GTAAATGATG CACCTGCTTT GAAATCTGCC GATATAGGGA TTGCTATGGG TATGAGCGGA ACAGAGGTTA GCCGGGAAGC ATCATCGATG ACTTTGGCCG ATGATGATTT TTCTACTATT GTGGCCGCGA TTTATGAAGG CCGGGCCATT TATGACAACA TCAGAAAATT CATTCGTTAT CTTTTAGGTT GTAATATTGG TGAGGTACTG GTTATGTTTT TGGCCTCACT ATTGGGCATG CCTTTGCCCT TAATTCCTAT ACAGATCCTC TGGGTAAATT TAGTAACTGA CGGCTTGCCC GCTATGGCTT TAGGGCTTGA ACCACCGGAA CCAGGGATAA TGAATCGTAA GCCCCGCCCT TCAAGTGAGG GGATATTTGC CCGCCGTTTG GGGTGGATGG TTCTTTCTCG CGGTTTTTAT ATTAGTATGG TTACTCTCCT GGTTTTTATA ATCGCTATCC TGTATGCTCG TCTTAATGGA ATAGATCCCT TACCACTTTC CCGCAGTATG GCTTTTACCA CCCTGGTCGC AGCACAGCTG TTTTATGTTT TTGAATGCCG CTCGGAGAAA TACACTGCCT TTGAACTGGG ATTCTTCCGC AACAAGTTTT TGCTTATTGC TGTTTTTTGT TCCATATGCA TGCATTTGAT GGTGCTTTAC CTGCCCTGTA TGCAGGGAAT CTTTTATTCG GTGGGTCTTA ATTACTGGCA ATGGGCTTTA ATTCTTATCT TAACGGGGTG GAAATTTATC TCCAAATTAA TTCTGTATTT ATGGAAAAGA GTTTTTGCTT TCAAATGGGA TTATGCTAAA ATTAAAGCTT AG
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Protein sequence | MTNNTWHSTG LDEILLSLNS KQEEGLSLTE VRKRQSIYSN SLEDDKRLSP LIIFINQFTD TMVLVLLGAT VISGLIGAMA DAITIMAIVV INATLGFIQE YRAERSLEEI KKLASPHAIV LREGRRVKLP ASELVPGDIV FLETGDKVPA DLRLLESFSL EIDEAILTGE SFPVKKNALI TIPDRTPLAE RINMAFMGTV ITRGRARAVI VTTGMNTEVG QIAKMMKETE RPLTPLQVRL DQLGKILIVI CLVVCTLVSL LGIYRGENIM VMLMAGISLA VAAIPEGLPA IVTVVLALGV QKMARRNAII RKLPAVETLG CTTVICSDKT GTLTQNQMTV GRLATIDTTM GITGNGYEPR GSFQQEANEI NPLSAINIRL IMEVALNCNN AILEKRKDSY QIQGDPTEAS LLVMAQKAGM TRLYKRQREI PFDSARKKMS IVVEADGEYL VFCKGALEVL IPSCKQIIKQ DQTQPLREEH KEYFYFLQEQ WAGEALRILG FAAKKIKPAD INLPDDALES GLTLLGICGM SDPPRRGVEK SVAACLNAGI TPIMITGDHP VTALAIAKKI GISEGNEVLT GSDLEQLTDQ DLYRKSLTTR VFARVAPEHK NRIVEVLKKN KEVVAMTGDG VNDAPALKSA DIGIAMGMSG TEVSREASSM TLADDDFSTI VAAIYEGRAI YDNIRKFIRY LLGCNIGEVL VMFLASLLGM PLPLIPIQIL WVNLVTDGLP AMALGLEPPE PGIMNRKPRP SSEGIFARRL GWMVLSRGFY ISMVTLLVFI IAILYARLNG IDPLPLSRSM AFTTLVAAQL FYVFECRSEK YTAFELGFFR NKFLLIAVFC SICMHLMVLY LPCMQGIFYS VGLNYWQWAL ILILTGWKFI SKLILYLWKR VFAFKWDYAK IKA
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