| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1240 |
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| Symbol | |
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| ID | 4282155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1431051 |
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| End bp | 1433762 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638138115 |
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| Product | hypothetical protein |
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| Protein accession | YP_753920 |
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| Protein GI | 114566766 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01116] sarco/endoplasmic reticulum calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA ATACCTGGCA CAGTACAGGC CTGGATGAAA TTTTGCTCTC CCTTAATAGC
AAGCAGGAAG AGGGATTAAG TCTTACTGAA GTAAGAAAAC GCCAAAGTAT ATATTCCAAT
TCCCTGGAAG ATGATAAAAG GCTTAGTCCT TTGATTATAT TTATAAATCA ATTTACCGAT
ACCATGGTAT TGGTTCTTTT AGGGGCTACA GTTATATCAG GCCTTATTGG AGCCATGGCT
GATGCCATTA CCATTATGGC TATAGTGGTA ATAAATGCGA CCCTGGGTTT TATCCAGGAG
TACCGGGCAG AACGATCCCT GGAGGAAATA AAAAAACTGG CTTCACCTCA TGCTATAGTT
TTGCGGGAAG GAAGGCGAGT CAAGCTGCCG GCTTCTGAAC TGGTACCGGG TGATATTGTT
TTTTTAGAAA CGGGAGATAA AGTACCTGCT GATCTTCGTT TGTTGGAAAG TTTCAGTCTG
GAAATAGATG AAGCGATTTT AACTGGAGAA TCCTTTCCGG TTAAGAAGAA TGCCCTTATC
ACTATCCCCG ATCGCACACC CCTGGCCGAA AGAATAAATA TGGCTTTTAT GGGAACCGTT
ATAACTCGAG GACGGGCAAG GGCAGTGATA GTCACAACCG GTATGAATAC AGAAGTAGGT
CAAATAGCAA AAATGATGAA AGAAACGGAA AGACCATTAA CACCCTTGCA GGTGAGGCTG
GACCAGTTGG GGAAAATCCT CATTGTTATT TGCCTGGTGG TTTGTACTTT AGTTAGTCTT
TTGGGCATCT ATCGCGGTGA AAATATTATG GTTATGCTTA TGGCAGGAAT AAGTCTGGCC
GTTGCTGCTA TTCCTGAAGG CCTTCCGGCA ATTGTAACGG TGGTATTGGC TTTGGGAGTA
CAAAAAATGG CCCGAAGAAA TGCCATTATA AGGAAACTAC CAGCAGTTGA GACCCTGGGA
TGTACCACGG TGATTTGCTC CGATAAGACT GGCACTTTGA CCCAGAATCA GATGACCGTG
GGAAGATTGG CTACTATCGA TACAACAATG GGGATAACAG GAAATGGCTA TGAACCTCGA
GGAAGCTTCC AGCAAGAAGC TAATGAGATT AACCCCCTTT CTGCCATAAA CATTCGCCTA
ATAATGGAGG TGGCTTTAAA CTGCAATAAT GCTATACTGG AAAAGCGCAA AGATAGTTAT
CAGATTCAAG GCGATCCCAC CGAAGCTTCG TTGCTGGTTA TGGCGCAAAA AGCAGGTATG
ACCAGGTTAT ATAAGCGTCA AAGAGAAATT CCCTTTGATT CCGCTAGAAA AAAGATGAGT
ATAGTAGTGG AAGCAGATGG AGAATACCTG GTTTTTTGCA AGGGTGCCCT GGAAGTCCTT
ATACCCTCTT GTAAGCAAAT AATCAAACAG GATCAAACTC AGCCTCTGCG GGAAGAACAC
AAAGAGTACT TTTATTTTTT GCAGGAACAA TGGGCGGGAG AAGCCTTAAG GATTCTAGGT
TTTGCTGCCA AGAAAATAAA ACCTGCCGAT ATAAATTTGC CGGATGATGC TTTGGAGTCC
GGCTTGACTT TATTGGGAAT CTGTGGAATG AGTGACCCGC CACGCCGCGG GGTAGAAAAA
TCAGTCGCAG CCTGTTTAAA TGCTGGAATA ACACCGATAA TGATTACCGG GGATCACCCG
GTTACTGCCC TGGCTATTGC CAAAAAGATA GGTATTAGCG AGGGCAATGA GGTTCTTACC
GGAAGTGATT TAGAACAATT GACTGACCAG GATTTATACC GAAAATCGCT AACAACCAGG
GTTTTTGCCC GAGTTGCTCC AGAACACAAA AACCGTATCG TAGAAGTTTT AAAGAAAAAT
AAAGAAGTTG TAGCTATGAC CGGTGATGGG GTAAATGATG CACCTGCTTT GAAATCTGCC
GATATAGGGA TTGCTATGGG TATGAGCGGA ACAGAGGTTA GCCGGGAAGC ATCATCGATG
ACTTTGGCCG ATGATGATTT TTCTACTATT GTGGCCGCGA TTTATGAAGG CCGGGCCATT
TATGACAACA TCAGAAAATT CATTCGTTAT CTTTTAGGTT GTAATATTGG TGAGGTACTG
GTTATGTTTT TGGCCTCACT ATTGGGCATG CCTTTGCCCT TAATTCCTAT ACAGATCCTC
TGGGTAAATT TAGTAACTGA CGGCTTGCCC GCTATGGCTT TAGGGCTTGA ACCACCGGAA
CCAGGGATAA TGAATCGTAA GCCCCGCCCT TCAAGTGAGG GGATATTTGC CCGCCGTTTG
GGGTGGATGG TTCTTTCTCG CGGTTTTTAT ATTAGTATGG TTACTCTCCT GGTTTTTATA
ATCGCTATCC TGTATGCTCG TCTTAATGGA ATAGATCCCT TACCACTTTC CCGCAGTATG
GCTTTTACCA CCCTGGTCGC AGCACAGCTG TTTTATGTTT TTGAATGCCG CTCGGAGAAA
TACACTGCCT TTGAACTGGG ATTCTTCCGC AACAAGTTTT TGCTTATTGC TGTTTTTTGT
TCCATATGCA TGCATTTGAT GGTGCTTTAC CTGCCCTGTA TGCAGGGAAT CTTTTATTCG
GTGGGTCTTA ATTACTGGCA ATGGGCTTTA ATTCTTATCT TAACGGGGTG GAAATTTATC
TCCAAATTAA TTCTGTATTT ATGGAAAAGA GTTTTTGCTT TCAAATGGGA TTATGCTAAA
ATTAAAGCTT AG
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| Protein sequence | MTNNTWHSTG LDEILLSLNS KQEEGLSLTE VRKRQSIYSN SLEDDKRLSP LIIFINQFTD
TMVLVLLGAT VISGLIGAMA DAITIMAIVV INATLGFIQE YRAERSLEEI KKLASPHAIV
LREGRRVKLP ASELVPGDIV FLETGDKVPA DLRLLESFSL EIDEAILTGE SFPVKKNALI
TIPDRTPLAE RINMAFMGTV ITRGRARAVI VTTGMNTEVG QIAKMMKETE RPLTPLQVRL
DQLGKILIVI CLVVCTLVSL LGIYRGENIM VMLMAGISLA VAAIPEGLPA IVTVVLALGV
QKMARRNAII RKLPAVETLG CTTVICSDKT GTLTQNQMTV GRLATIDTTM GITGNGYEPR
GSFQQEANEI NPLSAINIRL IMEVALNCNN AILEKRKDSY QIQGDPTEAS LLVMAQKAGM
TRLYKRQREI PFDSARKKMS IVVEADGEYL VFCKGALEVL IPSCKQIIKQ DQTQPLREEH
KEYFYFLQEQ WAGEALRILG FAAKKIKPAD INLPDDALES GLTLLGICGM SDPPRRGVEK
SVAACLNAGI TPIMITGDHP VTALAIAKKI GISEGNEVLT GSDLEQLTDQ DLYRKSLTTR
VFARVAPEHK NRIVEVLKKN KEVVAMTGDG VNDAPALKSA DIGIAMGMSG TEVSREASSM
TLADDDFSTI VAAIYEGRAI YDNIRKFIRY LLGCNIGEVL VMFLASLLGM PLPLIPIQIL
WVNLVTDGLP AMALGLEPPE PGIMNRKPRP SSEGIFARRL GWMVLSRGFY ISMVTLLVFI
IAILYARLNG IDPLPLSRSM AFTTLVAAQL FYVFECRSEK YTAFELGFFR NKFLLIAVFC
SICMHLMVLY LPCMQGIFYS VGLNYWQWAL ILILTGWKFI SKLILYLWKR VFAFKWDYAK
IKA
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