| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1146 |
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| Symbol | |
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| ID | 4283502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1326454 |
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| End bp | 1330164 |
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| Gene Length | 3711 bp |
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| Protein Length | 1236 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638138019 |
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| Product | ATP-dependent exoDNAse beta subunit |
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| Protein accession | YP_753827 |
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| Protein GI | 114566673 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCATT GGACCATAGA ACAGGAAGAA GCAATAAATG CGCGTAATAG CAACCTCCTG
GTAGCAGCCG CCGCCGGTTC GGGAAAAACT ACGGTTCTGG TGGAACGGAT AATTCAACTT
GTCCTTCGTG ATCGAATTGA TATCGATCGC CTGCTTATAG TAACTTTTAC CCAGGCCGCC
GCCGGAGAGA TGCGCGAAAG AATCAACGCC GCCTTTTTTA AAGAACTGGA GAAAGGAAGA
GAAGACGGGC ATCTCAGAAG GCAACTCTAT TTGTTAAATC GCTCCTCCAT CAGTACCATT
CATGCCTTCT GCAGCGATGT AGTACGGCAG CATTTTCACC TGGTTAATAT TGATCCTCAT
TTCAGAATTG CCGATAGTAC TGAGACTGAA TTGATTAAGA TGGAAGTCCT GGAAGAGCTT
TTGGATGGGG AGTACGAAAA GGGGAATGAT GGTTTTCTGG ATTTGGTGGA GGCGTTCGGC
AGCAATAAGG ATGATAAACC GCTGGAAGCT CTTATATTAC GCTTACACAG CTTTATTCAG
AGCCATCCCC AGCCGTTAAG CTGGTTAGAG GAGAAAATTG ATAATCTGGC TCTGGGTGAA
GATAATTGGG CGGAAAATCC CTGGGCCAGT GAGCTGAGCC AACAAATAAA GATAGAACTA
TCTGCTGCCC AGGATATTTT AAATCAAGCC CTCAAGCTCA GCAATAAAGC CGGTGGACCC
AGGGGATATC TTGAAGCTAT TGAAAGTGAT CAGAAATGGG TTGAGCTTTT GCTAAAGGCA
GCGGATCAGG GCCTGCCTGT CCTATATTCC TGCCTGCAGC AACTCAGTTT TACCCGCCTG
GGGAGAGTTT CCCGGGATGT GGATGAAAAC CTTAAGAATC AAGTAAAGAT TCTCCGGGAT
GAAAGCAAAA AAATACTTAA CGCTATAAAT AGTTTGCTGG GCCGTGATCC GCTGGAATAC
CTGCAGGATT TAAATGAAAT CTACTCCCTT ATGAAATACT TGGGGGAGAT CATACAAAGT
TTTGCGGAAA TTTACCAGGA AAAGAAAAGA GAGAAAGGCA TAGTCGATTT CAATGACCTG
GAGCATTTGG CTTTGCAGAT CCTGAGTAAT GAAGCAGTAG CTCGGGAATA CCGGGATTAT
TATAGTTACC TATTTATTGA TGAATACCAG GATAGTAATC TGGTACAAGA GACTATACTA
AACTATATCA AAAAAGAAGA TAACCTGTTT ATGGTGGGGG ATGTCAAACA GAGCATCTAT
CGCTTTCGAT TGGCTGATCC CTCTTTGTTT TTAGAGAAAC AAAAATCTTA CCCCTTGCAA
GATGGCAGCG TAAACAGAAG GGTTGATCTT AATAAGAATT TCCGGAGTCA TCCGGAAATA
CTCAATGCCG TAAATTATAT TTTCCGTCAT TTAATGTCAG AAGAACTGGG GGAAATAGAT
TATGATGAAA AATCCTATCT CTATCCCGGT CTTAACACTG GCCAGGAGCT AAAATACCAA
GAAATAGATA AAGCATCCAG CCAGGAAGGA AAGGAGAAAG AGAATACAGC TAAGAGGGTG
GAGATCTGTA TACTGGAAAA CAACCCGGAT CTTATTACCA AGTTAGAGGA GAATGAAACG
GAAGAACGAG AAATCCCGGG TGAAGCGGAA AATGATTTTA TTGAGCGCAT AATTGAAATG
GATAATACGG AAATAGAAGC CCTCTTAATT GCCCAAAAGA TCAGACAGCT CATACAGGAA
GATATTTATG ACCCTGAGCT ACAATGCATG AGAAAAATAG AATACCGGGA TATGGTAATA
TTGCTGCGCG CTACTCGAAA CTCTGCCGGG ATATTCATGG AACAGTTAAG CGCAGAAGGC
ATACCGGTTT ATGCTGATGC CAGTTCGGGT TATTTTGATA CTTTAGAGCT GAATCTGTTT
ATAAACCTTT TGCGCTTAAT TGATAATAAA AGACAGGACA TAGCTCTTCT GAGTGTGATG
CGCTCTCCTA TAGGTGGATT TAGTATTGAC GATTTTATTA AGATCAGGAC CAAGCTGATT
CCCCGACGCG AAAAGCAACC CTATTCTTTT TATGAGGCTA TGGAGTTTTA TATGGAAGAT
AATAATGATG ACTTGAAGGA TAGATTAGTG TTCTTCATAC AGCGCCTGAA GGAGTGGGAA
TTGGAGTCGC GTATTATGGC ATTAGATGAA TTTATGGGGA AGCTCTTCAT GGATACCGGT
TATTACTACT ATGCCGGGGC TATGCCGGGG GGGGGGCAAC GCCAGGCCAA CCTCAGAATT
CTGCTGCATC GGGCGCGAGA ATTCCAAAAG AGCTCTTTTA AAGGCCTGTT TAGTTTCATA
AAATACATAG AAAAAATCAA GTCCAGTGGG AGTGATATGG GTAATGCCTG CATTATCGGG
GAGAACGATA ATGTAGTACG CATTATGAGC ATCCACAAGA GCAAGGGCTT GGAGTTCCCA
GTGGTTATTC TGGGTGGATT GGGCAAAAAT TTTAATATTA GGGATAGCAA CGAAAATGTT
TTGTTGCACC GGAAGCTGGG AATAGGCCCT CGTTATATCA ATACCCAGCT AAGAACCTAT
CACGATACCA TTGCCCGCCT GGCCATTAAG AACCGGATAA AATTGGAGAA CCTGGCTGAA
GAAATGAGGA TACTCTATGT GGCTTGTACC CGCCCTCAAG AAAAGTTAAT TATGGTGGGA
ACTACCCGCC AACTGGAAAG TGCCTGGCGA AGATGGAGCC AGCCAGTAAA CTCCTATAAC
CAGTCCCGGG CCAGGAGTTT TCTGGATTGG CTTATCCCCA TTATTATGCG ACATAAAAAA
GAGGGGCAGT ACCTGCGGGA AATAGCCGGA GGAGATTGGG ACAGGGAAAT ACTATGGGAA
GATGAATCCA GGTGGAAAGT TAAGCTTATC AGTCCCTGGC AGTTAACAGC TGAGGAAATA
AGGAAAAAGG AAGAAAAGTA TGAATGGGAG AGATTATTAG AACAAGGGGG TTATTCCTGC
CCTTCTGCTG AAAGTGAAGA AATTATAAAG CGGTTGAACT GGAAATATCC TTACCAGGAA
GCAGAAAATA TTCCGGCCAA ACTATCCGTA AGCCAGGTCA GCCAGATTAG CAGCGGTTAT
TTGGAGGATG GAGCAGCTGA TACTTTTCTT ACCCGGGTTC CCGCTTTTCT AAGCGGAGAA
AAAGACAAGA AAACTAGGCT CAGCCCAGCG GATAAAGGCA GCATTGTCCA TCTGGTAATG
CAAAATATTG ATTACAGGCG AGTTAGCCGG GAGGATAGTA TTAATCAACA GCTGGGCGAG
ATGGTGGAAA GGGAAATCTT AACCTCGGAA CAACTTGCCG TAGTTGAGGT TAATAAAATA
TGGCGATTCT TCCAAACAAA GCTGGGACAA AGGGTATTAC AGGCAAAATG GCTATTTCGC
GAAGCACCTT TTAATCTGCT CATAGCAGCC AGCGAGGTTT TTCCTGCTTT GGAAAGCCAG
GAAGAACTTT TGATTCAGGG GATTATAGAC CTGTATTTTT ATGAGGGTGA AGATATTGTT
CTGCTCGATT TTAAAAGCGA TATCGTTCAC CATAAAAGTG AGGAGGAAAT CTTAGCTCCC
TACCGGGTAC AACTCAAACT CTACAAGAGA GCCCTGGAGA ATATCACCGA CCACAGGGTC
AAGGAGTCTT ATCTCTACTT TTTTGACTTG AACCGTGCAA TCAGAGTTTA G
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| Protein sequence | MAHWTIEQEE AINARNSNLL VAAAAGSGKT TVLVERIIQL VLRDRIDIDR LLIVTFTQAA
AGEMRERINA AFFKELEKGR EDGHLRRQLY LLNRSSISTI HAFCSDVVRQ HFHLVNIDPH
FRIADSTETE LIKMEVLEEL LDGEYEKGND GFLDLVEAFG SNKDDKPLEA LILRLHSFIQ
SHPQPLSWLE EKIDNLALGE DNWAENPWAS ELSQQIKIEL SAAQDILNQA LKLSNKAGGP
RGYLEAIESD QKWVELLLKA ADQGLPVLYS CLQQLSFTRL GRVSRDVDEN LKNQVKILRD
ESKKILNAIN SLLGRDPLEY LQDLNEIYSL MKYLGEIIQS FAEIYQEKKR EKGIVDFNDL
EHLALQILSN EAVAREYRDY YSYLFIDEYQ DSNLVQETIL NYIKKEDNLF MVGDVKQSIY
RFRLADPSLF LEKQKSYPLQ DGSVNRRVDL NKNFRSHPEI LNAVNYIFRH LMSEELGEID
YDEKSYLYPG LNTGQELKYQ EIDKASSQEG KEKENTAKRV EICILENNPD LITKLEENET
EEREIPGEAE NDFIERIIEM DNTEIEALLI AQKIRQLIQE DIYDPELQCM RKIEYRDMVI
LLRATRNSAG IFMEQLSAEG IPVYADASSG YFDTLELNLF INLLRLIDNK RQDIALLSVM
RSPIGGFSID DFIKIRTKLI PRREKQPYSF YEAMEFYMED NNDDLKDRLV FFIQRLKEWE
LESRIMALDE FMGKLFMDTG YYYYAGAMPG GGQRQANLRI LLHRAREFQK SSFKGLFSFI
KYIEKIKSSG SDMGNACIIG ENDNVVRIMS IHKSKGLEFP VVILGGLGKN FNIRDSNENV
LLHRKLGIGP RYINTQLRTY HDTIARLAIK NRIKLENLAE EMRILYVACT RPQEKLIMVG
TTRQLESAWR RWSQPVNSYN QSRARSFLDW LIPIIMRHKK EGQYLREIAG GDWDREILWE
DESRWKVKLI SPWQLTAEEI RKKEEKYEWE RLLEQGGYSC PSAESEEIIK RLNWKYPYQE
AENIPAKLSV SQVSQISSGY LEDGAADTFL TRVPAFLSGE KDKKTRLSPA DKGSIVHLVM
QNIDYRRVSR EDSINQQLGE MVEREILTSE QLAVVEVNKI WRFFQTKLGQ RVLQAKWLFR
EAPFNLLIAA SEVFPALESQ EELLIQGIID LYFYEGEDIV LLDFKSDIVH HKSEEEILAP
YRVQLKLYKR ALENITDHRV KESYLYFFDL NRAIRV
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