Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0095 |
Symbol | |
ID | 4281232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 103565 |
End bp | 105364 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638136997 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_752823 |
Protein GI | 114565669 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAGAG CTCTAAAAAA CATCGCACTA TATATTCTTA TAGTACTCCT GGCTCTCTTT GCCATGAAAA TGGTAAGCCG CTCGGATATA GAAATCAAGG AACTCAGCGA GCCGCAATTC TACCAGATGG TGGAACAGGG TCAGGTGAAG GCGGTTCGTG TAGAAGTAGC CGAGTTGGTT TATAACCTTA GCGGAGAGTT AAAAAATAAC AGCAAATTTA CTGCCACGGT TTCCAAGGAA TCTGACATTA TCAAGTTATT GCGGGAAAAG AAGGTAGATT ACACTACCCA ACCCGTGCCG CCCCCTTCCA TATGGATGAC CTTGCTTACT ACGCTATTTC CCATAATTAT TCTGGTGGTC TTCCTGCTCT TCATTATGAA CCAGACCCAG GGTGGCGGAG GCCGGGTTAT GCAATTCGGC AAAAGCAAAG CCCGCTTGAT GAGCGGAGAG GATGTAAAAG TATCCTTTAA GGATGTGGCC GGAGCGGAAG AGGCCAAAGA GGAAATGCAG GAAGTAGTAG AATTCCTGAA AAACCCGCAG AAATTTATTC AAATCGGAGC CAAGATTCCC CGTGGGGTTC TGCTTTACGG CGCTCCCGGA ACGGGGAAAA CCCTGATGGC CAAGGCCGTG GCCGGCGAAG CCGGAGTACC TTTCTTCTCC ATCAGCGGTT CCGACTTTGT GGAGATGTTT GTTGGCGTAG GTGCAGCCCG AGTCCGCGAC CTCTTCGAAC AGGCTAAGAA AAACGCCCCC TGTATAGTCT TCATTGATGA AATTGATGCC GTTGGACGCC AGCGGGGAGC TGGTCTGGGC GGTGGACATG ATGAAAGAGA ACAGACCTTG AACCAATTGC TGGTGGAGAT GGATGGATTC AGTACCGGTG AAGCCATTAT TGTCATGGCT TCCACCAATC GCCCGGACAT ACTGGACCCG GCGCTCTTGC GGCCAGGAAG ATTTGACCGG CATATATTGA TAGATAAACC TGATGTTAAA GGCAGAGAAG CCATACTAGG GGTTCATGTC CAGAATAAAC CCCTGGATGA TAACATTAAC ATGGAAATAT TAGCCAAGCG CACTCCCGGT TTTACCGGAG CTGACCTGGC CAATATGGTC AATGAGGCCG CCTTGCTCAC CGCTCGCCGC AACAAGAATA AAATCGGTAT GGAAGAACTG GAGGAATCCA TCGAAAGAGT ACTGGCCGGC CCGGAAAAGA AAAGCCGGGT TATCTCCGAA AAAGAAAAAC GACTGGTGGC TTATCATGAA GGCGGGCATG CGCTAGTAAG TTATTTCCTG CCTCATACGG ACAAATTGCA TAAAATCTCG ATTATTCCGC GGGGGCGGGC CGGGGGATAT ACCCTCTTGC TGCCGGAAGA AGACCGCAAT TACATCACCA AATCCTACCT GTTGGACGAG GTTACCACCC TCCTGGGCGG GCGGGTGGCC GAAGCTCTGG TACTAAATGA CATCAGCACC GGAGCCCAGA ATGACCTGGA AAGGGCCAGC GGTATAGTAC GCAAGATGAT AACCGAATTC GGCATGTCGG AAGAATTAGG GCCGCTTACC TTCGGTCATA AAAGTGAAGA AGTCTTCTTG GGACGGGATA TTTCCCGGGA TCGCAACTAT TCTGACGCCA TTGCCTATGC TATAGATAAA GAAGCCAGCC ACTATATGGA AAGCAGTTAC AAGAAGGCCG AAAAAATACT GCAGGAAAAT ATGGATAAAC TGCACCAGGT AGCTGCCCGC TTGATAGAAC AGGAAACCAT GGAAGGCGAA GAATTCGAAG AAATAATGAG CCAGGCCTGA
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Protein sequence | MDRALKNIAL YILIVLLALF AMKMVSRSDI EIKELSEPQF YQMVEQGQVK AVRVEVAELV YNLSGELKNN SKFTATVSKE SDIIKLLREK KVDYTTQPVP PPSIWMTLLT TLFPIIILVV FLLFIMNQTQ GGGGRVMQFG KSKARLMSGE DVKVSFKDVA GAEEAKEEMQ EVVEFLKNPQ KFIQIGAKIP RGVLLYGAPG TGKTLMAKAV AGEAGVPFFS ISGSDFVEMF VGVGAARVRD LFEQAKKNAP CIVFIDEIDA VGRQRGAGLG GGHDEREQTL NQLLVEMDGF STGEAIIVMA STNRPDILDP ALLRPGRFDR HILIDKPDVK GREAILGVHV QNKPLDDNIN MEILAKRTPG FTGADLANMV NEAALLTARR NKNKIGMEEL EESIERVLAG PEKKSRVISE KEKRLVAYHE GGHALVSYFL PHTDKLHKIS IIPRGRAGGY TLLLPEEDRN YITKSYLLDE VTTLLGGRVA EALVLNDIST GAQNDLERAS GIVRKMITEF GMSEELGPLT FGHKSEEVFL GRDISRDRNY SDAIAYAIDK EASHYMESSY KKAEKILQEN MDKLHQVAAR LIEQETMEGE EFEEIMSQA
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