Gene Swol_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0095 
Symbol 
ID4281232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp103565 
End bp105364 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content50% 
IMG OID638136997 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_752823 
Protein GI114565669 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAGAG CTCTAAAAAA CATCGCACTA TATATTCTTA TAGTACTCCT GGCTCTCTTT 
GCCATGAAAA TGGTAAGCCG CTCGGATATA GAAATCAAGG AACTCAGCGA GCCGCAATTC
TACCAGATGG TGGAACAGGG TCAGGTGAAG GCGGTTCGTG TAGAAGTAGC CGAGTTGGTT
TATAACCTTA GCGGAGAGTT AAAAAATAAC AGCAAATTTA CTGCCACGGT TTCCAAGGAA
TCTGACATTA TCAAGTTATT GCGGGAAAAG AAGGTAGATT ACACTACCCA ACCCGTGCCG
CCCCCTTCCA TATGGATGAC CTTGCTTACT ACGCTATTTC CCATAATTAT TCTGGTGGTC
TTCCTGCTCT TCATTATGAA CCAGACCCAG GGTGGCGGAG GCCGGGTTAT GCAATTCGGC
AAAAGCAAAG CCCGCTTGAT GAGCGGAGAG GATGTAAAAG TATCCTTTAA GGATGTGGCC
GGAGCGGAAG AGGCCAAAGA GGAAATGCAG GAAGTAGTAG AATTCCTGAA AAACCCGCAG
AAATTTATTC AAATCGGAGC CAAGATTCCC CGTGGGGTTC TGCTTTACGG CGCTCCCGGA
ACGGGGAAAA CCCTGATGGC CAAGGCCGTG GCCGGCGAAG CCGGAGTACC TTTCTTCTCC
ATCAGCGGTT CCGACTTTGT GGAGATGTTT GTTGGCGTAG GTGCAGCCCG AGTCCGCGAC
CTCTTCGAAC AGGCTAAGAA AAACGCCCCC TGTATAGTCT TCATTGATGA AATTGATGCC
GTTGGACGCC AGCGGGGAGC TGGTCTGGGC GGTGGACATG ATGAAAGAGA ACAGACCTTG
AACCAATTGC TGGTGGAGAT GGATGGATTC AGTACCGGTG AAGCCATTAT TGTCATGGCT
TCCACCAATC GCCCGGACAT ACTGGACCCG GCGCTCTTGC GGCCAGGAAG ATTTGACCGG
CATATATTGA TAGATAAACC TGATGTTAAA GGCAGAGAAG CCATACTAGG GGTTCATGTC
CAGAATAAAC CCCTGGATGA TAACATTAAC ATGGAAATAT TAGCCAAGCG CACTCCCGGT
TTTACCGGAG CTGACCTGGC CAATATGGTC AATGAGGCCG CCTTGCTCAC CGCTCGCCGC
AACAAGAATA AAATCGGTAT GGAAGAACTG GAGGAATCCA TCGAAAGAGT ACTGGCCGGC
CCGGAAAAGA AAAGCCGGGT TATCTCCGAA AAAGAAAAAC GACTGGTGGC TTATCATGAA
GGCGGGCATG CGCTAGTAAG TTATTTCCTG CCTCATACGG ACAAATTGCA TAAAATCTCG
ATTATTCCGC GGGGGCGGGC CGGGGGATAT ACCCTCTTGC TGCCGGAAGA AGACCGCAAT
TACATCACCA AATCCTACCT GTTGGACGAG GTTACCACCC TCCTGGGCGG GCGGGTGGCC
GAAGCTCTGG TACTAAATGA CATCAGCACC GGAGCCCAGA ATGACCTGGA AAGGGCCAGC
GGTATAGTAC GCAAGATGAT AACCGAATTC GGCATGTCGG AAGAATTAGG GCCGCTTACC
TTCGGTCATA AAAGTGAAGA AGTCTTCTTG GGACGGGATA TTTCCCGGGA TCGCAACTAT
TCTGACGCCA TTGCCTATGC TATAGATAAA GAAGCCAGCC ACTATATGGA AAGCAGTTAC
AAGAAGGCCG AAAAAATACT GCAGGAAAAT ATGGATAAAC TGCACCAGGT AGCTGCCCGC
TTGATAGAAC AGGAAACCAT GGAAGGCGAA GAATTCGAAG AAATAATGAG CCAGGCCTGA
 
Protein sequence
MDRALKNIAL YILIVLLALF AMKMVSRSDI EIKELSEPQF YQMVEQGQVK AVRVEVAELV 
YNLSGELKNN SKFTATVSKE SDIIKLLREK KVDYTTQPVP PPSIWMTLLT TLFPIIILVV
FLLFIMNQTQ GGGGRVMQFG KSKARLMSGE DVKVSFKDVA GAEEAKEEMQ EVVEFLKNPQ
KFIQIGAKIP RGVLLYGAPG TGKTLMAKAV AGEAGVPFFS ISGSDFVEMF VGVGAARVRD
LFEQAKKNAP CIVFIDEIDA VGRQRGAGLG GGHDEREQTL NQLLVEMDGF STGEAIIVMA
STNRPDILDP ALLRPGRFDR HILIDKPDVK GREAILGVHV QNKPLDDNIN MEILAKRTPG
FTGADLANMV NEAALLTARR NKNKIGMEEL EESIERVLAG PEKKSRVISE KEKRLVAYHE
GGHALVSYFL PHTDKLHKIS IIPRGRAGGY TLLLPEEDRN YITKSYLLDE VTTLLGGRVA
EALVLNDIST GAQNDLERAS GIVRKMITEF GMSEELGPLT FGHKSEEVFL GRDISRDRNY
SDAIAYAIDK EASHYMESSY KKAEKILQEN MDKLHQVAAR LIEQETMEGE EFEEIMSQA