Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24010 |
Symbol | |
ID | 8387725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2590775 |
End bp | 2591635 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976444 |
Product | metal-dependent hydrolase |
Protein accession | YP_003134225 |
Protein GI | 257056393 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.078651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACGGA ACACAGCCGT GGCCGCGGTG ATCGTCGCGG CCGTCCTCAC CCTGCTCACC GCGATGCTCA CCGTGCCCGG CACGGCCTCG GCGGAGCCGC GTCACGGGCC CCGGGTGCTG CGTGTCATGA GTTACAACAT CCACACCGGT ATCGGCACCG ACGGGGTGTC GGACCTGGGT CGGATCGCGT CGGTGATCCG CGACGCGGAC GTGGACGTCG TGGCCTTGCA GGAGGTCGAC GTGCATTGGG CCGACCGCAG TGATTACGTC GACCAGGCGA CCGAGCTGGC ACGGCTGACG GACATGTCGG TGTACTTCGC GCCGATCTAC GATCTCGACC CCGAGCCGGG GCGGGAGGAA CGCCGCCGCT ACGGCGTGGC CGTGTTGAGC CGTCACCCCG TCCTGTCGGC CACCAACCAC GAGATCAGCC GCTTGTCGAC CGTGGAGCCG GGAGCGGAAC CGGAGCCCAT GCCGGGTTTC GCGGAGGTCG TCGTCTCGGT ACGCGGCCTG CCGGTGCACG TCTACAACAC ACACCTGGAC TACCGGCCGG ACCCGACCGT CCGGAGTCGT CAGGTCACGG AGATGCTCGA CATCCTCCGG CAGGACCCGC CCCGCGCCCA TCAGCTGCTG CTGGGGGACT TCAACGCGGA ACCCGCGGCA CCGGAGTTGG CGCCGCTGTT CGAACGCCTG CGCGATGCGT GGGGGACACG GGGCGGCGGG TTGACGTATC CCGCCGAGGA CCCCGTCAAA CGGATCGACT ACATCACCGC GGGTGGCGGT GTGCGCGTGC TGAACGCCTC CGTCCCCGCT GTCGAGGCCT CCGATCACCG ACCCGTGGTC GCCACACTCC TCCTGCGGTG A
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Protein sequence | MSRNTAVAAV IVAAVLTLLT AMLTVPGTAS AEPRHGPRVL RVMSYNIHTG IGTDGVSDLG RIASVIRDAD VDVVALQEVD VHWADRSDYV DQATELARLT DMSVYFAPIY DLDPEPGREE RRRYGVAVLS RHPVLSATNH EISRLSTVEP GAEPEPMPGF AEVVVSVRGL PVHVYNTHLD YRPDPTVRSR QVTEMLDILR QDPPRAHQLL LGDFNAEPAA PELAPLFERL RDAWGTRGGG LTYPAEDPVK RIDYITAGGG VRVLNASVPA VEASDHRPVV ATLLLR
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