| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12520 |
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| Symbol | obgE |
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| ID | 8386589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1294449 |
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| End bp | 1295930 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975338 |
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| Product | GTPase ObgE |
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| Protein accession | YP_003133128 |
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| Protein GI | 257055296 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0536] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA
[TIGR03595] Obg family GTPase CgtA, C-terminal extension |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.337649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCC GGTTCGTGGA TCGCGTGGTG ATTCATCTCG CCGCGGGTAA CGGAGGGAAC
GGCTGCGCCT CGGTGCATCG CGAGAAGTTC AAACCGCTCG GTGGTCCCGA CGGTGGCAAC
GGCGGCCACG GCGGCGATGT GGTGCTCGTC GTCGACCCGG GTGTGCACAC CCTGTTGGAC
TTCCATTTCC GTCCCCATGC GCGAGCCGGA AACGGTAAGC AGGGGCAGGG TGGGCACCGT
AACGGTGCGG CCGGGGAGGA CCTGGAGTTG CGCGTGCCCG ACGGCACCGT CGTGCTCACC
GAGGACGGTG AGGTGCTGGC CGACCTGGTG GGCGCCGGCA CCCGCTTCGT GGCGGCCAAG
GGAGGCCGTG GCGGGCTCGG TAACGCCGCA CTCGCGTCGC GGGCGCGTAA GGCACCCGGT
TTCGCGCTGC TGGGAGAGCC GGGGGAGGAA CGCAACCTCG TGCTGGAGTT GCGTTCCGTC
GCCGACGTGG GACTGCTCGG CTTCCCCTCG GCGGGCAAGT CGTCGCTGAT CTCGGTGTTG
TCGGCCGCCA AGCCGAAGAT CGCCGACTAC CCGTTCACGA CGTTGGTGCC CAACCTCGGG
GTGGTGAGCG CGGGGGACAC CGTGTTCACC ATGGCCGACG TTCCCGGTCT CATTCCGGGG
GCGAGCCAGG GACGTGGCCT GGGCCTGGAC TTCCTGCGTC ACATCGAACG CTGCGCCGTG
TTGGTGCACG TGATCGATTG CGCGACGTAC GAGCCTGAGC GGGATCCGAT CTCGGACTTC
GACGCGTTGG AGAACGAGCT CGCGCAGTAC ACGCCCGTGC TCGGTGGGGA CCTCGACTCG
CGGCCGAGGG TCGTGGTCCT CAACAAGGTC GACGTGCCTG ATGCGGCCGA GCTGGCCGAG
ATGGTGAGGC CCGACTTCGA GGCACGCGGA CTGCGCGTGT TCGAGGTGTC CACCGCGACG
CACGCCGGGC TGCGGGAGTT GACCTACGCG CTCGGCCAGA TCGTGGAGGA GCACCGTGCC
GCGCAACCGC CGCCCGCGCC GACGAAGGTC GTCGTGACAC CGAAGGCCGT GGACGACGGT
GGTTTCACCG TGGAGCCGGA CCCCGAGGAA CCCGGTGGTT TCATCGTGCG CGGCGCCAAA
CCCGAACGGT GGGTGCGGCA GACGAACTTC GCCAACGATG AAGCCGTCGG CTATCTCGCC
GAACGGCTCT ACCGGCTCGG TGTGGAAAAG GAGCTCGCAC GGATGGGTGC CGAACCCGGC
TGTGCGGTCA CCATCGACGG CGTGACCTTC GATTGGGAGC CTTCCACTCC GGGTGTGGTG
GAGGCACTGA CCGGCCGTGG CAGTGATCCA CGGCTGGAGG ACCGGAGCAG GACGACCGCG
GCGGAGCGCA AGGAGGCTCG CCGCCTGCGC AGGGAGGGCA CAGGGCCCGA CCTGGACACC
CCCAACGACG AGGAAAGCGG GACCGAGGAC GCCGATGAGT GA
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| Protein sequence | MASRFVDRVV IHLAAGNGGN GCASVHREKF KPLGGPDGGN GGHGGDVVLV VDPGVHTLLD
FHFRPHARAG NGKQGQGGHR NGAAGEDLEL RVPDGTVVLT EDGEVLADLV GAGTRFVAAK
GGRGGLGNAA LASRARKAPG FALLGEPGEE RNLVLELRSV ADVGLLGFPS AGKSSLISVL
SAAKPKIADY PFTTLVPNLG VVSAGDTVFT MADVPGLIPG ASQGRGLGLD FLRHIERCAV
LVHVIDCATY EPERDPISDF DALENELAQY TPVLGGDLDS RPRVVVLNKV DVPDAAELAE
MVRPDFEARG LRVFEVSTAT HAGLRELTYA LGQIVEEHRA AQPPPAPTKV VVTPKAVDDG
GFTVEPDPEE PGGFIVRGAK PERWVRQTNF ANDEAVGYLA ERLYRLGVEK ELARMGAEPG
CAVTIDGVTF DWEPSTPGVV EALTGRGSDP RLEDRSRTTA AERKEARRLR REGTGPDLDT
PNDEESGTED ADE
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