| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11230 |
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| Symbol | |
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| ID | 8386460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1158523 |
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| End bp | 1159977 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644975213 |
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| Product | cytidyltransferase-related enzyme |
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| Protein accession | YP_003133006 |
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| Protein GI | 257055174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.448325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.110426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCCCC TCGTGGTGCT CGGCGATGCC CTGCTCGACG TGGACGTCGA GGGCAGTGCC
ACGCGCCTGT GCCCGGAGGC GCCCGTGCCC GTGGTGGACG TCGAGGGGGA ATGGGTGCGC
CCCGGCGGGG CGGGACTCGC GGCGATGTTG CTGGCCACCC GAACCACCCC GGACGTGGTG
CTCGTGACGG CGCTGGGCGC CGACACCACC GGACGTCGCC TCGCGTCGCT GCTGGCACGC
GACGTGGAGG TGTTGCGGCT GCCGTTGGAC GGCGAGACGC CGCGCAAGAC CCGGGTGCGG
GCCTCGGGAC AGTCCCTCAC ACGGTTGGAC ACCGGGCGGG GCCGCGCGGC CGAGGCCCCA
CTACCCGCAC GGGTACGGCA CGCGGTCGAC GGCGCCGGGG CGGTGCTGGT GTCCGACTAC
GGCCGTGGCG TGACCGCGCA CCCCGAGCTG CGACGGCTGT TGACGGAGCT GACCACCCAC
GTCCCGGTGG TCTGGGACCC GCATCCACTC GGCCCACCCC CGGTTCCGGG AGCGACCTTG
GTGACGCCGA ACGAACGCGA GGCACTGGCC GTGGCCGAGG GGTGCGTGGA CGTCGCCGAC
GCCGCCGAGG CCGTACGACG CGGCTGGGGG TGCCGTGCCA CGGCGGTGAC GCTGGGGGCG
GAAGGCGCCG TGCTGGCCAC TCCCGACTCG GCCGAACCCA TCCCGGTGCC GGTGCCGGAC
GGCGCGTTCC TCGGCGCCCA GCAGCTCGAC ACCTGCGGTG CGGGCGACCG GTTCGCCAGC
GCCGCCGTGG CCGCGTTGGC CGAGGGCGCC GATGTCACCG ACGCCGTCGT CACGGCGGTG
GACACGGCCT CCCGATTCGT CGCCGCGGGC GGTGCCTCGG CGCTGTCCGT GCACTACGCC
GACCGCCGGG ACGGCCCCGA GGGGACGCAC TTTCCCGGAA GGTCGGCGTT CGAGTTCGGC
GAGCACGTAC GCAGACGCGG GGACCGCCTC GTCGCCACGG GTGGCTGTTT CGACCTGTTG
CACGCCGGGC ACGTGAGTCT GCTGAAACAA GCGAGGGCAC TCGGTGACGC GCTCGTGGTG
TGTGTCAACT CCGACGAGTC CGTGCGTCGA CTGAAAGGCC CCGGACGTCC GGTGGTCCCC
GCCGCCGACC GTGCCCGACT GCTGGCCGAA CTGTCCTGTG TGGATTCGGT GGTGGTGTTC
GAGGAGTCGA CACCGTCGGC GGTGTTGGAA CGGCTGCGAC CCGACGTGTG GGTCAAAGGG
GGCGACTACG CGGACGACGA GCTGCCCGAG GCCGAGGTGG TGCGCCGTCA CGGCGGTGAG
GTGGTGCTGG TACCGACCCT CGACGGCTAC TCCACCACCC GGTTGTTGCA GGAGGCGCTT
CGCCGACCGA GGGCGACGGT GCACGACGGA CGAGGGTGGG CACCGGGAAC GATCGGGAGC
AAGGAGGCAC GATGA
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| Protein sequence | MRPLVVLGDA LLDVDVEGSA TRLCPEAPVP VVDVEGEWVR PGGAGLAAML LATRTTPDVV
LVTALGADTT GRRLASLLAR DVEVLRLPLD GETPRKTRVR ASGQSLTRLD TGRGRAAEAP
LPARVRHAVD GAGAVLVSDY GRGVTAHPEL RRLLTELTTH VPVVWDPHPL GPPPVPGATL
VTPNEREALA VAEGCVDVAD AAEAVRRGWG CRATAVTLGA EGAVLATPDS AEPIPVPVPD
GAFLGAQQLD TCGAGDRFAS AAVAALAEGA DVTDAVVTAV DTASRFVAAG GASALSVHYA
DRRDGPEGTH FPGRSAFEFG EHVRRRGDRL VATGGCFDLL HAGHVSLLKQ ARALGDALVV
CVNSDESVRR LKGPGRPVVP AADRARLLAE LSCVDSVVVF EESTPSAVLE RLRPDVWVKG
GDYADDELPE AEVVRRHGGE VVLVPTLDGY STTRLLQEAL RRPRATVHDG RGWAPGTIGS
KEAR
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