Gene Suden_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0078 
Symbol 
ID3763793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp84610 
End bp86481 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content31% 
IMG OID 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_392594 
Protein GI78776279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.331351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAATA ATATTAGTTT TTATAATTTT ATGCATAAAC AAATTTTAGT ATTAATCGCC 
CTGTTTGTCT CTACTGCAAC CTCATATGTT TTTATTGGAA TTGCTTACTC CTCTTATATT
ATAGAGCCAT TATGGTATAT GTTTGTTCTT ACTCTGTCAT ATTTTGGATA TAAGCTCTAT
GTAGAGTACT CAGACTCTAA TTTAACGATT CAAGAGAAAG AGATATGGCT TAAAAAACTG
CGTTATTTTA TATTTTCTTA CTTCTCATCA TGGACAATTA TGTTTGTTGT TTATGCTATG
CGTGATAATA TAGAACTTCA CTATTTGGCT ATTTTTACTC AACTTGGTGT CTCTGTTGTT
GCTACTACCC TTCTCGTTTC AGAAAAAAAG TTAGCAACTT TTATACTAGC TTCTTCAATG
CTTCCAATAA CAATATATCT TTTGTTAATT GGAGAATTTT ACTCATATAT AATAGCAATA
TTAACTATTG TGCTTGCATG GGTTCTTTAC TACGGTTTAA GAAATACTTA TGGGTACCTT
CAAAAAAATC AGTATCAAGC TAATCATGAT TATCTGACAA ATCTTGGAAA TAGACGCTAT
TTTGTTGAGC TTCTTAAAGA TGCAATAAAG AAGCAAAAGA GCAATAATAA GTACATGTTT
CTTTTTTTAA TAGATTTAGA CCATTTCAAA ACAATAAATG ACACATTAGG ACATGATATA
GGAGATAAAT TACTAAGTGA AGTTGCTAAA AGAATGGGCT TGCTTGCAAA ATTAAATCGT
AGCACTATAT CAAGAATCGG TGGGGATGAA TTTTGTTTAC TTAGTGATAC ATACGAAGAT
AAAGTCACTT GCCTAAAACG TGCGCAAAGT TTTGCGCAAG AGCTTTTAGA AACAATTAAA
CATACATATA TAGTAGATGA GCACAATTTA TACATTAGCT CAAGTATAGG TGTAAGTATT
ATAGACAATC CAAACATAAC TGCAAATACT CTTATAAAAG AGGCAGATAT CGCTATGTAT
GAAGCAAAAC TAAAAGGCAG AGATGGAGTA ATACTCTTTA ACAATGAACT CTCAGTTAGA
GTAGAGAGAA AATTAGAAGT AGAGAGATTT TTACGTTTTG CTATAAAAAA AGAAGAAATA
ACACTAAACT ATCAGCCACA AGTAGATAAA AAAGGCAAAG TCGTTGGCTG TGAAGTGCTA
GTGAGATGGC ATAATGAACA GTTAGGGAGT GTTGGCCCAG ACGAGTTTAT ACCGATTTCT
GAGCAGACAG GGTTTATAAT TGAGCTTGGA CACTATATTT TAGAAGAGAG TTTTAAAACA
CTTAGCGAAT GGGATAAAAA AGGTCTAAAG CTAGAGCAGT TTTCTATAAA TATTAGCATG
AGACAGATGT TTTGTAACAC ATTTATAGAT GACATGTTGT TATTGTGTGC AAAATATCTT
AATGATTCTC TTAGTTCAAA ACTGATTTTT GAGATTACAG AGTCAAGTGC TGCTGAAGAT
ATACCAAAGT TGATAAACAC AATGAACAGA GCAAAGGCAT GTGGTATCCG TTTCTCTATG
GATGATTTTG GTACTGGTTA TTCATCGCTT AGTTATCTTC GCCAAATTCC AATATATGAG
TTGAAAATAG ATAAAGCTTT TATAAATGAG TTAGGTAATC CAAAAAAAGA TGCAAATATG
GTAAAAACAA TCCTAAATAT TGCTAAAAAT TTAGGATTAA GTGTTGTTGC TGAAGGCGTA
GAGACGCAAA TGCAAGAGAA ATTTTTAATA GATGAAAAGT GTGATATTTT ACAAGGATAC
TACTTTTCAA AACCCCTCAG TAAAGATAAG TTTGAAGAGT TTTATTTAAA AGGTAAAATA
AGCTCTCTCT AA
 
Protein sequence
MLNNISFYNF MHKQILVLIA LFVSTATSYV FIGIAYSSYI IEPLWYMFVL TLSYFGYKLY 
VEYSDSNLTI QEKEIWLKKL RYFIFSYFSS WTIMFVVYAM RDNIELHYLA IFTQLGVSVV
ATTLLVSEKK LATFILASSM LPITIYLLLI GEFYSYIIAI LTIVLAWVLY YGLRNTYGYL
QKNQYQANHD YLTNLGNRRY FVELLKDAIK KQKSNNKYMF LFLIDLDHFK TINDTLGHDI
GDKLLSEVAK RMGLLAKLNR STISRIGGDE FCLLSDTYED KVTCLKRAQS FAQELLETIK
HTYIVDEHNL YISSSIGVSI IDNPNITANT LIKEADIAMY EAKLKGRDGV ILFNNELSVR
VERKLEVERF LRFAIKKEEI TLNYQPQVDK KGKVVGCEVL VRWHNEQLGS VGPDEFIPIS
EQTGFIIELG HYILEESFKT LSEWDKKGLK LEQFSINISM RQMFCNTFID DMLLLCAKYL
NDSLSSKLIF EITESSAAED IPKLINTMNR AKACGIRFSM DDFGTGYSSL SYLRQIPIYE
LKIDKAFINE LGNPKKDANM VKTILNIAKN LGLSVVAEGV ETQMQEKFLI DEKCDILQGY
YFSKPLSKDK FEEFYLKGKI SSL