Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Suden_0078 |
Symbol | |
ID | 3763793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurimonas denitrificans DSM 1251 |
Kingdom | Bacteria |
Replicon accession | NC_007575 |
Strand | + |
Start bp | 84610 |
End bp | 86481 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_392594 |
Protein GI | 78776279 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.331351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAATA ATATTAGTTT TTATAATTTT ATGCATAAAC AAATTTTAGT ATTAATCGCC CTGTTTGTCT CTACTGCAAC CTCATATGTT TTTATTGGAA TTGCTTACTC CTCTTATATT ATAGAGCCAT TATGGTATAT GTTTGTTCTT ACTCTGTCAT ATTTTGGATA TAAGCTCTAT GTAGAGTACT CAGACTCTAA TTTAACGATT CAAGAGAAAG AGATATGGCT TAAAAAACTG CGTTATTTTA TATTTTCTTA CTTCTCATCA TGGACAATTA TGTTTGTTGT TTATGCTATG CGTGATAATA TAGAACTTCA CTATTTGGCT ATTTTTACTC AACTTGGTGT CTCTGTTGTT GCTACTACCC TTCTCGTTTC AGAAAAAAAG TTAGCAACTT TTATACTAGC TTCTTCAATG CTTCCAATAA CAATATATCT TTTGTTAATT GGAGAATTTT ACTCATATAT AATAGCAATA TTAACTATTG TGCTTGCATG GGTTCTTTAC TACGGTTTAA GAAATACTTA TGGGTACCTT CAAAAAAATC AGTATCAAGC TAATCATGAT TATCTGACAA ATCTTGGAAA TAGACGCTAT TTTGTTGAGC TTCTTAAAGA TGCAATAAAG AAGCAAAAGA GCAATAATAA GTACATGTTT CTTTTTTTAA TAGATTTAGA CCATTTCAAA ACAATAAATG ACACATTAGG ACATGATATA GGAGATAAAT TACTAAGTGA AGTTGCTAAA AGAATGGGCT TGCTTGCAAA ATTAAATCGT AGCACTATAT CAAGAATCGG TGGGGATGAA TTTTGTTTAC TTAGTGATAC ATACGAAGAT AAAGTCACTT GCCTAAAACG TGCGCAAAGT TTTGCGCAAG AGCTTTTAGA AACAATTAAA CATACATATA TAGTAGATGA GCACAATTTA TACATTAGCT CAAGTATAGG TGTAAGTATT ATAGACAATC CAAACATAAC TGCAAATACT CTTATAAAAG AGGCAGATAT CGCTATGTAT GAAGCAAAAC TAAAAGGCAG AGATGGAGTA ATACTCTTTA ACAATGAACT CTCAGTTAGA GTAGAGAGAA AATTAGAAGT AGAGAGATTT TTACGTTTTG CTATAAAAAA AGAAGAAATA ACACTAAACT ATCAGCCACA AGTAGATAAA AAAGGCAAAG TCGTTGGCTG TGAAGTGCTA GTGAGATGGC ATAATGAACA GTTAGGGAGT GTTGGCCCAG ACGAGTTTAT ACCGATTTCT GAGCAGACAG GGTTTATAAT TGAGCTTGGA CACTATATTT TAGAAGAGAG TTTTAAAACA CTTAGCGAAT GGGATAAAAA AGGTCTAAAG CTAGAGCAGT TTTCTATAAA TATTAGCATG AGACAGATGT TTTGTAACAC ATTTATAGAT GACATGTTGT TATTGTGTGC AAAATATCTT AATGATTCTC TTAGTTCAAA ACTGATTTTT GAGATTACAG AGTCAAGTGC TGCTGAAGAT ATACCAAAGT TGATAAACAC AATGAACAGA GCAAAGGCAT GTGGTATCCG TTTCTCTATG GATGATTTTG GTACTGGTTA TTCATCGCTT AGTTATCTTC GCCAAATTCC AATATATGAG TTGAAAATAG ATAAAGCTTT TATAAATGAG TTAGGTAATC CAAAAAAAGA TGCAAATATG GTAAAAACAA TCCTAAATAT TGCTAAAAAT TTAGGATTAA GTGTTGTTGC TGAAGGCGTA GAGACGCAAA TGCAAGAGAA ATTTTTAATA GATGAAAAGT GTGATATTTT ACAAGGATAC TACTTTTCAA AACCCCTCAG TAAAGATAAG TTTGAAGAGT TTTATTTAAA AGGTAAAATA AGCTCTCTCT AA
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Protein sequence | MLNNISFYNF MHKQILVLIA LFVSTATSYV FIGIAYSSYI IEPLWYMFVL TLSYFGYKLY VEYSDSNLTI QEKEIWLKKL RYFIFSYFSS WTIMFVVYAM RDNIELHYLA IFTQLGVSVV ATTLLVSEKK LATFILASSM LPITIYLLLI GEFYSYIIAI LTIVLAWVLY YGLRNTYGYL QKNQYQANHD YLTNLGNRRY FVELLKDAIK KQKSNNKYMF LFLIDLDHFK TINDTLGHDI GDKLLSEVAK RMGLLAKLNR STISRIGGDE FCLLSDTYED KVTCLKRAQS FAQELLETIK HTYIVDEHNL YISSSIGVSI IDNPNITANT LIKEADIAMY EAKLKGRDGV ILFNNELSVR VERKLEVERF LRFAIKKEEI TLNYQPQVDK KGKVVGCEVL VRWHNEQLGS VGPDEFIPIS EQTGFIIELG HYILEESFKT LSEWDKKGLK LEQFSINISM RQMFCNTFID DMLLLCAKYL NDSLSSKLIF EITESSAAED IPKLINTMNR AKACGIRFSM DDFGTGYSSL SYLRQIPIYE LKIDKAFINE LGNPKKDANM VKTILNIAKN LGLSVVAEGV ETQMQEKFLI DEKCDILQGY YFSKPLSKDK FEEFYLKGKI SSL
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