Gene Suden_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSuden_0011 
Symbol 
ID3763830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurimonas denitrificans DSM 1251 
KingdomBacteria 
Replicon accessionNC_007575 
Strand
Start bp16989 
End bp18692 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content39% 
IMG OID 
Producthemolysin activation/secretion protein-like 
Protein accessionYP_392527 
Protein GI78776212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.811976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA TGAAAATAAC AAATTTAACA GCTAAAGCAC TGACTTTATC ATTTGTAACA 
AGCTCACTTC TCGTTGGGGC TTCTATCCCC TCAAGCAGCG ATATCCAAAG AGAGGTTCAA
CCTCCAAAAG ACCTACCAAA AAAAGTAACT CCTTTGGTTG AAGTAGGTGG TGTGCAAAAG
TATGCACCTG TTATGCAAGA TGATAAAAGC GGAAAAACAA TCTTTGTAAA AAGCTTTAAA
ATCACAGGTG CTATTCACAT GTCAGAATCA AAGCTTCAAT CTCTCATTGG CTCTTACATG
GACAAAGAGT TAACATTTGC ACAGCTTCAA GAGGTAGCTT CTATCATCAC TAAAGAGTAT
CGTGCCAATG GCTACTTTGT GGCTCGTGCT TATATCCCTA TTCAGAGTAT GCAAGATGGT
GTTGTAGAGA TTGCAATCAT AGAGGGAAAC TACGGTAAGT TTATACTAGA GAATAACTCA
CATGTAAGAA CACCGATAGT CCAAGCGATG CTTGATGATG TAAAGAGTGC AAACATAGTA
AGCACAAATA CACTAGAGCG TGCTATGCTT ATCATAAATG ACACCCCCGG TGCAAAAGTA
ACAGCAGCAG ATGTTAAACC TAGGCAAGAA GTAGGAACAA GTGACTTTGC TATAACAACA
GAAACTAAAC CTTGGTACGA CGGCTATATT TTAGGCGATA ACTACGGAAG CAGATATACA
GGCGAAAATA GACTAATGGT AGGAGTAAAC CTTAACTCTC TTGCAGGTTT AGGAGATAAG
CTCAGTCTAA GTGGGCTTAT GAGTAGTGAG AGAGATTTAA AAAACGGAAG AATTGCTTAC
AGTGTTCCTC TTATGGCAAA TGGTCTTAGA GCAGAGGTAG GTTACTCTAA AACAGATTAC
TCTTTAGCTC AAGAGTACAA ATCTCTTGAT GCTTATGGAA CATCAAACAC ACTTGATGCA
ACTCTATCTT ATCCAATCAT CAGAACAAGA TTAGAGACTC TAAGAGTCTC ATCTACTCTA
GCAATAAAGA GTTTAAATGA TAAACAAGCA GGAGTAACCA CAAGCGATAA AGATGCTAAG
TCAATCAACC TTGCCCTCTC TTACACTAAA GAGCAAAAAC TCTTTGGACT TGACTCACAG
ATAAACTCAG GAGTCTCATA CACTTATGGA GATTTAAAGT TTATTGACGC TGCCTCAAAA
ATAGCAGATG CAGCAGGAGC AAACACACAG GGAAACTACT CTAAAGTAAA TGGTTATGTT
GGTATTTCAA CGCTACTGCC ACAAGAGCTA ACACTTCAAA CTAACCTACA AGCTCAAAAA
GCTCTAGGCG GTAAAAACCT TGATGGAAGT GAAGATATGT CCATAGGTGG AAGTAACGGT
GTTAAACTAT TTCCAGATTC AGAACACAGC GCAGAAAATG CCTTACTCTG GAGTATTGAG
TTAACAAGAG CACTCCCTAC AATAAATAAC TACTCTCATA AATTTGGACT ATTCTATGAC
GTTGGATATG CTTCAATGCA AGATGACAGT AAAGACCCTA CTTTTCAAAA CAGAACTCTT
CAAGATGTAG GAGTAAGTTA CTACGCTTCA TACAAATCAC TATTTGCTAA AGCTCAAGTT
GCAACTGCAA TAGGTAGTGA AGAAGTAACA AGTGAACCTA AGTACAGCAC TAGGGTTTTA
GTTCAGGGTG GGGTTAGTTT TTAG
 
Protein sequence
MKIMKITNLT AKALTLSFVT SSLLVGASIP SSSDIQREVQ PPKDLPKKVT PLVEVGGVQK 
YAPVMQDDKS GKTIFVKSFK ITGAIHMSES KLQSLIGSYM DKELTFAQLQ EVASIITKEY
RANGYFVARA YIPIQSMQDG VVEIAIIEGN YGKFILENNS HVRTPIVQAM LDDVKSANIV
STNTLERAML IINDTPGAKV TAADVKPRQE VGTSDFAITT ETKPWYDGYI LGDNYGSRYT
GENRLMVGVN LNSLAGLGDK LSLSGLMSSE RDLKNGRIAY SVPLMANGLR AEVGYSKTDY
SLAQEYKSLD AYGTSNTLDA TLSYPIIRTR LETLRVSSTL AIKSLNDKQA GVTTSDKDAK
SINLALSYTK EQKLFGLDSQ INSGVSYTYG DLKFIDAASK IADAAGANTQ GNYSKVNGYV
GISTLLPQEL TLQTNLQAQK ALGGKNLDGS EDMSIGGSNG VKLFPDSEHS AENALLWSIE
LTRALPTINN YSHKFGLFYD VGYASMQDDS KDPTFQNRTL QDVGVSYYAS YKSLFAKAQV
ATAIGSEEVT SEPKYSTRVL VQGGVSF