| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2373 |
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| Symbol | |
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| ID | 5611425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2887208 |
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| End bp | 2888524 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933284 |
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| Product | hypothetical protein |
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| Protein accession | YP_001474110 |
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| Protein GI | 157375510 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0606] Predicted ATPase with chaperone activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.836855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAGAG TGAATGCCGG CGATTCCATG CGAGAGCATA GAGTCGTAAA TACGAGTGTA
AATTCTGAAT TGGCTCCGAG ACCTAAATCA ATTGAAGATA CGGGCATTCA AGAGTCTCTT
TTACTTGACC TTATGCTTAA GCATCTACTC GGAGGCGGGG TATTAACTAA ATCTGAATTG
GTTATGAAGA TGGGCATTTC TGGCGGCATT ATTCAAAACC TGTTGGATAA TGCTAAACAG
CTTGCTTGGG TTGAAAACAG ACAATCGACT CCCGATGGAC AGATGCGATA TGCGCTAAGT
CATGGAGGAG ACGAATACGC CAAACAAGCA TCTGCCAAGA GTGGTTATCG TGGATTAGTG
CCAGTGCCGC TTGCTCAGTA CACTGACATT TGTCAGAAAC AATCCAGCCG AAAAAATCCA
ATTACCTTAG AGATGTTACA GTACGGATTA CAGGCACTGG TTTTGCCCAA TGATCTTCTG
CGCAAGATAG GTCCAGCTCT GAATTCGAGC CGACCGGTTC TTATTTATGG GCCTCCGGGA
ACGGGGAAAA GTTATCTTTG CCGTAACCTC AATTTAACGT TAGGTGATAA TGTCCTGATC
CCTTATGCAA TTGCAATCGG GAACGAGGTG ATACAAGTTT ATGATCCACA ACTGCACCAT
AAGGTTGAGA GCACTACGTC CGTTAATGCT CTGGACTTGG TACAAGGCCA TGACCCTCGC
TGGATCGAGT GTAAGAGACC CCTTCGTATT ACCGGTGGTG AATTAAACGC TGAGATGCTA
GAGGTGCAAT TTGATAGCCA TAGCCGAACC TACATGGCTC CGATTCAGTT AAAGGCTAAC
AATGGCATTT TACTCTTGGA TGATTTAGGT CGTCAAAAGA TCAGCGCAAA ACAGCTTTTT
AACCGATGGA TTATTCCTAT GGAAGAGCGA AGAGATTTTC TCTCTCTGCA ATCGGGTGAA
CATTTTGAGA TCCCTTTCGA GCTAATCTTA CTTTTTTCTA CTAACCTAAA TCCTAATGAC
CTGGTTGATG ATGCATTTCT ACGTCGTCTT GGATACAAGA TTCACTTCGA CGCATTAGAT
GAGCCTTTAT ATCGTAGGAT CTGGTTTCAG GTGTGTGAAG AGAAAGGGCT TAGCTGTAGT
GAAGAGATGT TTCAGCATCT GCTCATTGAA TTTCATCAGA GGTATGCAAA GCCCTTGATC
CCATGTTATC CACGCGATCT GTTGGGAATT ATGGCCGATC AAATGAGTTT TATGGAGTTA
AAACCTGAGG TGACGAAGGC ATTAATTACA GAAGCTTGGT CAATCTATTT TGTGTAG
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| Protein sequence | MFRVNAGDSM REHRVVNTSV NSELAPRPKS IEDTGIQESL LLDLMLKHLL GGGVLTKSEL
VMKMGISGGI IQNLLDNAKQ LAWVENRQST PDGQMRYALS HGGDEYAKQA SAKSGYRGLV
PVPLAQYTDI CQKQSSRKNP ITLEMLQYGL QALVLPNDLL RKIGPALNSS RPVLIYGPPG
TGKSYLCRNL NLTLGDNVLI PYAIAIGNEV IQVYDPQLHH KVESTTSVNA LDLVQGHDPR
WIECKRPLRI TGGELNAEML EVQFDSHSRT YMAPIQLKAN NGILLLDDLG RQKISAKQLF
NRWIIPMEER RDFLSLQSGE HFEIPFELIL LFSTNLNPND LVDDAFLRRL GYKIHFDALD
EPLYRRIWFQ VCEEKGLSCS EEMFQHLLIE FHQRYAKPLI PCYPRDLLGI MADQMSFMEL
KPEVTKALIT EAWSIYFV
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