| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1871 |
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| Symbol | |
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| ID | 5609725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2254314 |
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| End bp | 2256686 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932757 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | YP_001473610 |
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| Protein GI | 157375010 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000196099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000414181 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCAAT ATGTACTCTG GTATCAAGAA TTAGGCATGG GTGACGTCAA CAAGGTAGGC
GGTAAGAATG CTTCTCTTGG TGAGATGATT AGTAACTTAG CTAATGCAGG TGTTCAAGTG
CCTGGCGGTT TTGCCACCAC CTCGTACGCG TTCAATGAGT TTCTTGAACA AAGCGGACTT
AACCAGAAGA TATACGACAT TCTAGATACT CTAGATGTAG ATGACGTGAA CGCACTCGCT
ACAGCCGGTG CACAGATCAG ACAATGGGTG ATTGACACCC CGTTCCACCC CGAATTTGAG
CAAGTTGTTC GTGACTCTTA CGATACACTT TCCTCTCAAA CCAAAGAAGC TTCTTTTGCT
GTTCGCTCGT CGGCAACGGC TGAAGATATG CCTGATGCGT CTTTCGCGGG TCAGCAAGAA
ACATTCCTGA ACGTTAAAGG TTATGATTCT GTACTGGTCG CGATAAAGCA TGTTTTTGCT
TCTTTGTTTA ACGATCGCGC TATCTCTTAC CGTGTTCACC AGGGTTACGA CCATAAGGGC
GTCGCACTGT CTGCTGGCGT TCAGCGTATG GTTCGCTCTG ACACGGCAGC ATCTGGTGTT
ATGTTCACCA TGGACACCGA ATCTGGGAAC AATGATGTGG TATTTATTAC CTCTTCATTC
GGTCTTGGTG AGATGGTGGT ACAAGGTGCG GTTAACCCGG ATGAGTTTTA TGTTCATAAA
CCAAGTTTAA CAGCGGGCCA TAAAGCGGTT GTACGTCGCA ATATTGGCAG CAAGTTAATT
CAGATGGTTT ATTCGGACGA TCTCGACCAC GGTAAACAAG TTAAAATTGA AGATGTTGCA
GCCGATAAGC GCCGCGAATT TTCAGTGAAC GATGAAGAAG TCATGGAGCT TGCTAAGCAA
GCCATAATCA TCGAGCAGCA CTACGGTCGT CCAATGGACA TCGAATGGGC AAAAGATGGT
AATGATGGCA AGCTTTATAT TGTTCAAGCA CGCCCTGAGA CCGTTCGTTC TCGTGAAGAT
GTGCAACTGA TTGAACGCTA CCATCTTAAG ACTAAGGGTG ACGTTCTATG TGAAGGCCGT
GCTATTGGCC ATAAGATCGG CAGTGGTGTG GCTAAAGTCT TGTCATCAAT TGCTGACATG
GATCAAATTA AAGAAGGTGA CGTGCTCGTT ACCGATATGA CTGACCCTGA TTGGGAGCCA
ATCATGAAGC GCGCAAGCGC TATCGTCACT AACCGTGGTG GCCGTACTTG TCACGCTGCA
ATTATTGCAC GTGAACTAGG GGTTCCTGCT GTTGTTGGTT GTGGTGACGT CACTGAACGC
ATTAAGAATG GTCAGGAAGT GACAGTTTCT TGTGCCGAAG GCGACACTGG CTTTATCTTC
GATGGTATTC AAGATTTTGA TGTTGTACGT TCTCGTGTAG ATTCTATGCC TGAGCTGCCA
ATGAAGATCA TGATGAATGT CGGTAACCCA GATAGAGCAT TTGATTTTGC CCGCCTTCCT
AATGAAGGTG TTGGTCTTGC TCGCCTTGAG TTCATCATCA ACCGCATGAT TGGTATTCAC
CCTAAGGCCT TGCTTGAGTT TAACCAGCAA GATGCAGCCC TTCAGGAAGA GATCCACGAG
ATGATTGCAG GTTATGAATC ACCTGTTGAA TTCTATGTTG CACGCCTTGT TGAAGGTATG
GCGACCATCG CATCTGCTTT CCATCCAAAG AAAGTGATTA TTCGTATGTC TGACTTTAAG
TCTAACGAAT ACGCTAACTT GGTCGGTGGT GACAGATACG AGCCAGAGGA AGAGAACCCT
ATGTTGGGCT TCCGTGGCGC GAGTCGTTAC ATCTCAGAAT CTTTCCGTGA CTGTTTTGCG
CTTGAATGTG AAGCGGTTAA ACGTGTTCGT AATGAGATGG GCTTAACGAA TGTTGAGATC
ATGATCCCAT TCGTACGTAC GGTTGATGAA GCGAAGCAGG TTATCGAACT GCTTAAAGAG
GAAGGTCTAG AGCGTGGTAA AGATGGTCTT CGCGTCATCA TGATGTGTGA ACTGCCTTCA
AATGCACTGC TTGCCGATCA GTTCCTTGAG CACTTCGATG GTTTCTCTAT CGGGTCTAAC
GATTTGACTC AGCTAACACT CGGCTTAGAT CGTGACTCTG GCATCATCAG TCATCTATTC
GATGAGCGTA ATGATTCGGT TAAAGCGTTA ATGGCAATGG CCATTAAAGC AGCCAAGGCT
AAAGGTGCCT ATGTTGGCAT TTGCGGTCAG GGACCTTCTG ATCATGCTGA TTTCGCAGCC
TGGTTGGTTG ACCAAGGCAT TGATACGGTA TCGCTAAACC CAGATACAGT TATCGATACT
TGGTTGTACC TAGGCAAAGA ACACGCGCAA TAA
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| Protein sequence | MQQYVLWYQE LGMGDVNKVG GKNASLGEMI SNLANAGVQV PGGFATTSYA FNEFLEQSGL
NQKIYDILDT LDVDDVNALA TAGAQIRQWV IDTPFHPEFE QVVRDSYDTL SSQTKEASFA
VRSSATAEDM PDASFAGQQE TFLNVKGYDS VLVAIKHVFA SLFNDRAISY RVHQGYDHKG
VALSAGVQRM VRSDTAASGV MFTMDTESGN NDVVFITSSF GLGEMVVQGA VNPDEFYVHK
PSLTAGHKAV VRRNIGSKLI QMVYSDDLDH GKQVKIEDVA ADKRREFSVN DEEVMELAKQ
AIIIEQHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLK TKGDVLCEGR
AIGHKIGSGV AKVLSSIADM DQIKEGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA
IIARELGVPA VVGCGDVTER IKNGQEVTVS CAEGDTGFIF DGIQDFDVVR SRVDSMPELP
MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ DAALQEEIHE
MIAGYESPVE FYVARLVEGM ATIASAFHPK KVIIRMSDFK SNEYANLVGG DRYEPEEENP
MLGFRGASRY ISESFRDCFA LECEAVKRVR NEMGLTNVEI MIPFVRTVDE AKQVIELLKE
EGLERGKDGL RVIMMCELPS NALLADQFLE HFDGFSIGSN DLTQLTLGLD RDSGIISHLF
DERNDSVKAL MAMAIKAAKA KGAYVGICGQ GPSDHADFAA WLVDQGIDTV SLNPDTVIDT
WLYLGKEHAQ
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