Gene Sros_7939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7939 
Symbol 
ID8671264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8750591 
End bp8751877 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter (substrate-binding protein) 
Protein accessionYP_003343338 
Protein GI271969142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.50295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.560439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC GGTGGATGGC GGCCGTCGCG GTCACCGTGG CGGGCCTGCT CACCCTGACG 
GCCTGCGGCG ACGGCGGCGG CGCCGCGCAA ACCCCGCAGG CCGGCGGAGA GAAGAAGGTT
GAGGTCTTCT CCTGGTGGAC GGGACCGGGC GAGGCCGACG GCCTGAAGGC CATGAAAGAG
ATCTTCGAGA AGCAGAACCC CGGCCTGACG TTCTTCGACG CGGCCGTGGC GGGCGGTTCC
GGCGACAAGG CGCGCGCCCT GCTGGCCACC AAGCTGCAGG CCGACACCCC GCCGGACACC
TTCCAGGGGC ACGCGGGCGC CGAGCTGCAG GGCTACATCA AGGCCGGTGA CCTGGAGCCG
GTCAACTCCC TCTACGACGA GCTCAAGCTG AAGGACGTCT TCCCGCAGCA GCTCGTCGAC
CAGATCAGCG TGCAGGGCCA GATCTACTCG GTCCCGGTGA ACATCCACCG CTCCAACGTG
ATGTGGTTCA ACCCCGCCGT GCTCAAGGAG GCGGGCGTCA CCGAGGTGCC CAAGACGATC
GAGGAGTTCA CCGCCGCCCT GGAGAAGGTC AAGAAGACGG GCAAGATCCC GCTCGCGATC
GGCTCCGAGT GGACGATGGT GCACCTGCTG GAGAGCGTGC TGCTCGGCTC GCTCGGCACC
GAGGCCTACA ACCAGCTCTG GACCGCGGGG TCCGACTGGT CGGGTCCGGC GATGACCAAG
GCGCTCAACG ACTTCAAGAC GGTCCTGTCC TACGCCGGGG ACCCGGCCGA CGACTGGCAG
CCCGCGGCCA AGCAGGTCGC CGACGGCCAG GCCGCGTTCA CGATCATGGG CGACTGGGCG
TACGGCTACT TCCACAACCC GCCGGACGGC GGCCTGGGCA AGAAGTCCAA GACCGACTTC
GACTGGGCGC CCTCGCCCGG CACCGGCGGC ACCTTCATGT GGCTGTCGGA CAGCTTCACC
CTGCCCAAGG GCGCGCCGAA CCGCGCCGGG GCGGTGGCCT GGCTGAAGGT GGCCGCGAGC
AAGGAGGGCC AGGACGCCTT CAACCCCAAG AAGGGCTCCA TCCCGGCCCG CAAGGACGCC
GACACCTCCC TCTACACCGA CTACCTCGCC GACGCGCTGA AGGACTGGGG GAGCAACAAG
CTCGCCGGGT CCATCCAGCA CGGCGTCACC GTCAACGACG CCTGGCGGGT CTCGATCAAC
GAGGCGGTCG GCCTCTTCCA CACCGACAAG GACGTGGCCG CGCTCCAGGC CGCGCTGGCC
GAGGCCGCCA AGAACTCGGG TCAGTGA
 
Protein sequence
MRRRWMAAVA VTVAGLLTLT ACGDGGGAAQ TPQAGGEKKV EVFSWWTGPG EADGLKAMKE 
IFEKQNPGLT FFDAAVAGGS GDKARALLAT KLQADTPPDT FQGHAGAELQ GYIKAGDLEP
VNSLYDELKL KDVFPQQLVD QISVQGQIYS VPVNIHRSNV MWFNPAVLKE AGVTEVPKTI
EEFTAALEKV KKTGKIPLAI GSEWTMVHLL ESVLLGSLGT EAYNQLWTAG SDWSGPAMTK
ALNDFKTVLS YAGDPADDWQ PAAKQVADGQ AAFTIMGDWA YGYFHNPPDG GLGKKSKTDF
DWAPSPGTGG TFMWLSDSFT LPKGAPNRAG AVAWLKVAAS KEGQDAFNPK KGSIPARKDA
DTSLYTDYLA DALKDWGSNK LAGSIQHGVT VNDAWRVSIN EAVGLFHTDK DVAALQAALA
EAAKNSGQ