Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3362 |
Symbol | |
ID | 5077984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3912235 |
End bp | 3913017 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500563 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001184873 |
Protein GI | 146294449 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAC GTATACCAGC TTCTTTTATC CCCAAAAGCA TTACAGTGGC GACCTGCGCC GCATTATTTG TTTCGGTAGC CAGTTTTGCA GGCACAGGTC TGAAAACCGA TGCAGATAAA ACCTCCTACA GCATTGGTGC TTCTATTGGT AATTACATTT CAGGCCAAGT CTACAACCAA GTTGAATTGG GCTCAGAGGT CAATGTCGAC TTAGTTGTGC AAGGTTTTGT GGATGCGCTT AAAGATAAAC AGCAATTAAC CGACGAAGAA GTGCTGACCT ACCTGAACCA AAGAGCAGAA CAACTCAATG CAGCAAGAGC CGTCGTTGCT GAAAAACAAA TGGCAGAAAC CAAAAAGGCA AGTGCGGCAT ATCTTGCTGA AAATCAAAAA AAGTCTGGCG TTAAAGTTAC CGCCTCTGGT CTTCAATACG AAGTCTTAAC CCAAGGTAAA GGTCATAAAC CCAATCCAGA AGATGTGGTC ACAGTGGAAT ATGTTGGCAC TCTTATCAAT GGGACTGAGT TTGAAAATAC GGTTGGACGT AAAGAGCCTA CTCGCTTTGC ATTAATGTCA GTGATCCCCG GCTGGGAAGA GGGATTAAAG TTGATGCCTG TGGGGTCTAA ATACCGTTTT GTGGTACCCG CAAGCCTTGC CTATGGCGCT GAAGCTGTAG GCATTATCCC ACCTGAGTCA GCACTTATCT TTGAAATTGA ACTGAAAAAT ATTGAGAAAC CCAGCGAAAT GAAAGAGATG AAAAATAAAA AGATGATGCC TGCACACGGT TAA
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Protein sequence | MKTRIPASFI PKSITVATCA ALFVSVASFA GTGLKTDADK TSYSIGASIG NYISGQVYNQ VELGSEVNVD LVVQGFVDAL KDKQQLTDEE VLTYLNQRAE QLNAARAVVA EKQMAETKKA SAAYLAENQK KSGVKVTASG LQYEVLTQGK GHKPNPEDVV TVEYVGTLIN GTEFENTVGR KEPTRFALMS VIPGWEEGLK LMPVGSKYRF VVPASLAYGA EAVGIIPPES ALIFEIELKN IEKPSEMKEM KNKKMMPAHG
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