| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3170 |
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| Symbol | |
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| ID | 5080113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3691132 |
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| End bp | 3693075 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500367 |
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| Product | ABC transporter related |
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| Protein accession | YP_001184681 |
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| Protein GI | 146294257 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.018636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGCCA CATTACTTGA AATTTCAGGT TGCTATCGCA CTTTTCAGGC GGGAGAACAG
CAGCTTACCG TACTAAAAGA TGTGAACTTA ACGATTGAAC GTGGCGAGAT GGTTGCCATT
GTCGGCGCCT CTGGTTCGGG CAAATCGACC CTAATGAATA TTCTTGGCTG CTTAGATAAA
CCGTCGAAGG GGGCGTACTT TATCAATGGA CAAGATACTT CCACCATGGA TGCCGATGAG
TTAGCTCAAT TACGGCGTGA ACATTTTGGT TTTATTTTTC AGCGTTATCA TTTGCTTAGC
GATCTTACTG CGATAGGTAA CGTGGAAGTT CCTGCGGTTT ATGCAGGTAA AGAACGAAGT
GCCAGAAAAG ACAGAGCCGA ACATTTATTA ACTCGCTTAG GATTAGGTGA TCGACTCGAT
CATAAACCTA ATCAGCTCAG TGGTGGACAG CAGCAGCGGG TCAGTGTGGC GCGTGCGTTG
ATGAATGGCG GTGATGTGAT CCTTGCTGAC GAGCCCACGG GTGCATTGGA TAGCCACAGC
GGTGAAGAAA TGATGCAATT GCTGCAGGAG CTTCACAGCG ATGGTCATAC CATCATTATC
GTAACCCACG ATATGAATGT AGCCCAATAT GCCGACCGGA TTATTGAAAT TAAGGACGGC
ATAATTATCA GTGACGAACG TAAAACTAAG GCACCAAAGT ACGTCGATAC GGTTGTCACT
AAGATAAATA ACCGTATTCG AGTGGCCTCG TGGGATAGAT ATGTTGAAGC GTTCAAAATG
GCGCTACTTG CCATGTCGAC TCATAGATTA CGCACCTTTC TCACTATGCT TGGCATTATT
ATTGGTATTG CCTCGGTTGT TTCCGTCGTT GCATTAGGAG AAGGTTCCCA GCGAGAAATT
CTTAATAGCA TTAGCTCAAT GGGGACTAAT ACGATTGATA TTCGCCCAGG CTTTGGGTTT
GGTGATCGCC GTTCAGGAAA AGTGAAAACC TTAATTGTTA AAGATGCCGA TGCATTGAAA
CACTTACCTT ACGTTGACAG TGTTACACCA ACCGTTGATT CAAGTATGAC GTTGCGTTAT
GGCAATAAAG CGGTTACCAC GGTCGTGAAT GGTGTTGGCC CAGAGTTCTT CAGGGTACGA
GGTTATGAGC TGGCTATGGG GCAGTTCTGG GATGAAGATA GTGTTTCATC GCTTGCTCAA
GATGCTGTGA TTGACGATAA GGTTCGTAAA GAGTTATTCC CTCGTAGTTC ACCTATTGGT
GAGGTGATTT TTATCGGGAA TCTACCCGTG CGGATTATTG GTGTGACTGA ACCTAAAGAC
AGCGTATTTG GTAAAAGTGA TTCACTGAAT GTGTGGCTAC CTTATACAAC GCTATCGGGA
CGTATTGTCG GGAAAAACTA CCTGAATGGT ATCACCGTAA GACTCAATGA ATCGGTGCCG
AGTAATGCCG CTGAACAGGG CATTATAACT TTGCTGAAAA TGCGCCATGG AATAGAGGAT
TTTTTCACTA TTAATACGGA TGCAATTAGA CAGAATATTG AAAAAACGAC GGCAACGATG
ACCTTGCTTA TCTCGGCAAT TGCGGTGATA TCCCTGATTG TGGGCGGGAT TGGGGTGATG
AATATCATGT TGGTTTCGGT AACCGAACGT ACTCGTGAAA TTGGTGTACG TATGGCAGTC
GGGGCGCGTC AGAGTGATAT TTTGCGTCAG TTCCTGATTG AAGCTGTGTT GGTCTGTTTA
TGTGGTGGCA CTTTAGGTAT CGCCTTGGCC TATTTAATTG GCGTGGTGTT TGCTCAAACG
GGAGGTAGTT TCCAAATGAT TTATTCCACT ACCTCGATTG TCGCTGCTTT TGCCTGTTCG
ACGTTAATCG GTGTGCTATT TGGCTTTTTA CCCGCCCGCA ACGCGGCGCG ATTAGATCCC
GTTGACGCCT TAGCAAGAGA GTAA
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| Protein sequence | MSATLLEISG CYRTFQAGEQ QLTVLKDVNL TIERGEMVAI VGASGSGKST LMNILGCLDK
PSKGAYFING QDTSTMDADE LAQLRREHFG FIFQRYHLLS DLTAIGNVEV PAVYAGKERS
ARKDRAEHLL TRLGLGDRLD HKPNQLSGGQ QQRVSVARAL MNGGDVILAD EPTGALDSHS
GEEMMQLLQE LHSDGHTIII VTHDMNVAQY ADRIIEIKDG IIISDERKTK APKYVDTVVT
KINNRIRVAS WDRYVEAFKM ALLAMSTHRL RTFLTMLGII IGIASVVSVV ALGEGSQREI
LNSISSMGTN TIDIRPGFGF GDRRSGKVKT LIVKDADALK HLPYVDSVTP TVDSSMTLRY
GNKAVTTVVN GVGPEFFRVR GYELAMGQFW DEDSVSSLAQ DAVIDDKVRK ELFPRSSPIG
EVIFIGNLPV RIIGVTEPKD SVFGKSDSLN VWLPYTTLSG RIVGKNYLNG ITVRLNESVP
SNAAEQGIIT LLKMRHGIED FFTINTDAIR QNIEKTTATM TLLISAIAVI SLIVGGIGVM
NIMLVSVTER TREIGVRMAV GARQSDILRQ FLIEAVLVCL CGGTLGIALA YLIGVVFAQT
GGSFQMIYST TSIVAAFACS TLIGVLFGFL PARNAARLDP VDALARE
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