| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2633 |
|---|
| Symbol | |
|---|
| ID | 5080686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3053454 |
|---|
| End bp | 3054398 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001184153 |
|---|
| Protein GI | 146293729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00133263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAATC TAAGTCATCT ACAAAGAAGC TCGATTATTG CAGCGTTTAA AAGAAGTTTG
CTGCTCCTTC CTATGTTAAC GAGTGTTGCT ATAGGGGCGG AAGACACGGC TCCAGAGCGA
AAACCGTTTA AATTAAGTAT TGCCCAAGTC AGCACTCAAA GTGCAGAGGT GTCGGATAGC
AATACCGAGC TACAACGGGA TACTTTATTA CTTAACGCAG GAGTAAATGT TCCTTTAAAC
AGACAGTGGT CAGTCGGTAT TAATTTTGGA TACGACAGGC TGGATTACGA TTGGCGCAAT
ATCAATTTGA CAGGAGCAAA CAATGTTTCA TCATTGTTTG GGGCAGATGG ACAGGCTTGG
GATGATATCA ATCGTTATCG TGCTGGTGTG TCTTTAACTT ACCGTTTAGA TAAGCATTGG
GCATTTTTTT TAGCGCCGCA GCTCCAATAT GCCTATGCAG ATACGGCATC CTTTAACCAT
GCTCAGAGTT ATGGTGTCGT GGCTTCTGCA ATGTATGTGT TTGATTTTGG CAACATGATA
GGTTTTGGGG TGGCTTATCT CAATGATATT GATGAAGTTC GCACCGTTCC ATATCTTGCG
ATGCGATGGC AGATAAATGA CAATTGGGCA CTTGCTAATC CTTTTAAAGC CGGTTTTAGT
GGTCCTGCAG GATTAGAGCT AAGTTATCAA TTTAATTCCG ATTGGAATAT TGGATTTGGT
AGTTCGAAGC GTACCGAAAG ATTCTTAATC GAAGACGATG ATACTGCAGT GGAAATTAAC
GAATGGGTGG GGTATGTCCG CGGTGGTTGG CAAGCTACGC CTGCAGTATC TGTTAATCTT
TATGCTGGTT ACTATTTTAA TGGCGAGCTA GAAGTGACGC GTCAAGCTGC TGTTGATATG
GATAACCAAG GCGCAGCCGC CTTGGATATT GAATTTAAAT TTTAA
|
|---|
| Protein sequence | MANLSHLQRS SIIAAFKRSL LLLPMLTSVA IGAEDTAPER KPFKLSIAQV STQSAEVSDS
NTELQRDTLL LNAGVNVPLN RQWSVGINFG YDRLDYDWRN INLTGANNVS SLFGADGQAW
DDINRYRAGV SLTYRLDKHW AFFLAPQLQY AYADTASFNH AQSYGVVASA MYVFDFGNMI
GFGVAYLNDI DEVRTVPYLA MRWQINDNWA LANPFKAGFS GPAGLELSYQ FNSDWNIGFG
SSKRTERFLI EDDDTAVEIN EWVGYVRGGW QATPAVSVNL YAGYYFNGEL EVTRQAAVDM
DNQGAAALDI EFKF
|
|---|
| |