Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2243 |
Symbol | |
ID | 5080215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2582162 |
End bp | 2584531 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499405 |
Product | phosphoenolpyruvate synthase |
Protein accession | YP_001183763 |
Protein GI | 146293339 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0079831 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAGCAAT ACGTACTCTG GTATCAGGAA TTAGGCATGG GTGACGTCAA CTTAGTTGGC GGTAAAAATG CTTCTCTTGG CGAGATGATC AGCAATCTAG CTAATGCCGG TGTTCAAGTA CCTGGCGGAT TTGCGACTAC TTCTTATGCG TTCAATGAGT TCCTTGAACA AAGTGGAGTA AACCAGAAGA TTTATGACAT CCTAGCCACA TTGGATGTAG ATGATGTCAA TGCACTGGCA AAAGTAGGTG CACAGATCAG ACAATGGGTG ATTGACACCC CATTCCAACC AGCTTTAGAG CAAGCCATTC GTGAAGCTTA CGATAAACTT GCCGCTGAAA CTAGCGATGC GTCATTTGCA GTACGTTCTT CTGCCACTGC AGAAGACATG CCAGATGCCT CTTTTGCTGG TCAGCAAGAA ACCTTCTTAA ACGTGAAAGG ATTTGACTCC GTTCTCGTGG CTATCAAGCA CGTGTTCGCG TCACTCTTTA ACGACCGTGC GATTTCTTAC CGTGTTCACC AAGGTTACGA ACACCACGGT GTTGCTCTGT CTGCCGGCGT ACAACGCATG GTTCGTTCAG ACAAAGCGGC GTCAGGCGTG ATGTTCACTA TGGACACTGA ATCTGGCAAC AACGATGTCG TCTTTATCAC TTCCTCTTTC GGTCTGGGTG AAATGGTCGT TCAAGGTGCG GTGAACCCTG ACGAATTCTA TGTTCACAAG CCGATTTTAT CCCAAGGCCA TAAAGCCGTT GTTCGCCGTA ATATCGGTAG CAAGCTCATC CAGATGGTGT ATTCCGATGA TGCTGCTCAC GGCAAACAAG TCAAAATTGA GGACGTTGCT GGCGATAAAC GTCGTCAATT CTCCATCAAT GATGCTGAAG TGATGGAACT GGCTAAACAA GCCATGGTTA TCGAAAAACA CTACGGTCGT CCAATGGACA TCGAGTGGGC GAAAGACGGT AATGATGGCA AACTGTATAT CGTGCAAGCG CGTCCTGAAA CGGTTCGTAG CCGTGAAGAT GTGCAACTGA TTGAGCGTTA TCACTTAAAG AGCCGTGGCG CGGTGATCTC TGAAGGTCGT GCTATTGGTC ATAAAGTGGG TTCAGGTGTG GCTAAGGTAT TAACCTCTAT CGCGGATATG GATCAAATCC AACCCGGCGA TGTGTTAGTA ACTGATATGA CCGACCCTGA TTGGGAACCT ATCATGAAGC GCGCCAGCGC CATCGTCACT AACCGTGGCG GTCGTACCTG TCATGCGGCG ATTATTGCCC GTGAACTAGG TGTACCAGCG GTAGTAGGTT GTGGTGACGT GACTGACCGT ATCAAAAATG GCCAGTTAGT GACAGTGTCT TGCGCAGAAG GTGATACTGG CTTTATTTAC GAAGGTAAAC AAGAGTTTGA AGTGATTTCA AACCGCGTTG ACTCACTGCC AGCTTTACCA ATGAAGATTA TGATGAACGT GGGTAACCCT GATCGTGCAT TTGATTTTGC CCGTTTGCCA AACGAAGGTG TGGGTCTAGC GCGTTTAGAG TTCATTATCA ACCGTATGAT TGGTATTCAC CCCAAAGCAC TGCTTGAGTT TAACCAACAA GATGCAGCGC TTCAGGAAGA AATCAACGAG ATGATCGCAG GTTATGAATC ACCCGTTGAG TTCTATATTG CGCGCTTAGT AGAGGGTATC GCATCAATCG GTTCAGCTTT CTATCCGAAG AAGGTGATCG TGCGTATGTC AGACTTTAAG TCTAACGAGT ACGCAAACTT AGTTGGCGGT GACAGATACG AGCCAGAAGA AGAAAACCCA ATGTTGGGCT TCCGCGGTGC AAGCCGTTAT ATCTCTGAAT CTTTCCGTGA TTGTTTTGCC CTAGAATGTG AAGCTATCAA ACGTGTCCGT AATGACATGG GACTGAAAAA TGTTGAAGTT ATGATCCCAT TCGTTCGCAC TGTGAAAGAA GCTGAGCAAG TTGTAGGTCT ATTGGCTGAG CAAGGTTTAG AGCGTGGTAA AGACGGTTTA CGCGTCATTA TGATGTGTGA AGTACCTTCA AACGCCTTGT TAGCAGATCA ATTCCTTGAA CACTTCGATG GCTTCTCTAT CGGCTCAAAC GATTTAACTC AGCTAACGCT CGGTTTAGAT CGTGACTCAG GCATTATTAG CCACCTGTTC GATGAGCGTG ATCAAGCTGT TAAGATATTA TTATCGATGG CGATTAAAGC AGCTAAAGCG AAAGGTGCTT ATATTGGTAT ATGCGGTCAA GGCCCATCAG ATCATGCTGA TTTTGCTGGT TGGTTAGTGG AGCAGGGCAT TGATACTGTG TCACTTAATC CTGACACCGT AATTGATACA TGGCTATATT TAGCTGAAGC TCACGGGTGA
|
Protein sequence | MQQYVLWYQE LGMGDVNLVG GKNASLGEMI SNLANAGVQV PGGFATTSYA FNEFLEQSGV NQKIYDILAT LDVDDVNALA KVGAQIRQWV IDTPFQPALE QAIREAYDKL AAETSDASFA VRSSATAEDM PDASFAGQQE TFLNVKGFDS VLVAIKHVFA SLFNDRAISY RVHQGYEHHG VALSAGVQRM VRSDKAASGV MFTMDTESGN NDVVFITSSF GLGEMVVQGA VNPDEFYVHK PILSQGHKAV VRRNIGSKLI QMVYSDDAAH GKQVKIEDVA GDKRRQFSIN DAEVMELAKQ AMVIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLK SRGAVISEGR AIGHKVGSGV AKVLTSIADM DQIQPGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA IIARELGVPA VVGCGDVTDR IKNGQLVTVS CAEGDTGFIY EGKQEFEVIS NRVDSLPALP MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ DAALQEEINE MIAGYESPVE FYIARLVEGI ASIGSAFYPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP MLGFRGASRY ISESFRDCFA LECEAIKRVR NDMGLKNVEV MIPFVRTVKE AEQVVGLLAE QGLERGKDGL RVIMMCEVPS NALLADQFLE HFDGFSIGSN DLTQLTLGLD RDSGIISHLF DERDQAVKIL LSMAIKAAKA KGAYIGICGQ GPSDHADFAG WLVEQGIDTV SLNPDTVIDT WLYLAEAHG
|
| |