| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2078 |
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| Symbol | |
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| ID | 5079504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2377865 |
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| End bp | 2379712 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499240 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_001183598 |
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| Protein GI | 146293174 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000218784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCTA ACCCATCGTT TTTCAAGAGA ATATGTTTGT TTATTTGGAA TATCCTCAAC
GGAACCCGTA AACTCATCCT CAATCTGATC TTTTTTGGTA TCTTGGCAGT CATCATGATT
TCCATAACTG CCGGCGAAGA TATCCAAGTC GAAGATAACT CGGCACTGGT ACTTAACCTA
GCCGGTTCTA TCGTCGATCA AAAACAACAG ATTGATCCTA TAGAAGCGGC GCTCAAACAA
GGGAATAAGG CAAATGCCGA TGGTGAAATC CTGCTCGCAG ATGTGTTATA TGTGATTGAT
AACGCAGCAC AAGATACAAG GATAACAACC CTAGTTTTAG ATTTAGCCGA TCTTAAACGT
GCGGGGATCA GTAAACTACA ATCTATAGGT AACGCCATTA ACCGCTTTAA AGAAAGCGGC
AAACAAGTGG TTGCCATTGG TAATTATTAC GAACAGAATC AATATTTTCT CGCCAGCTTT
GCCGATACGA TATATCTCAA TCCTCAGGGG GGTATTTCAC TCGATGGCCT CAGCATGTAC
AACTTATACT TCAAATCGGC TTTAGAGAAA CTCAAAATAA AAGCCCATAT TTTTCGGGTC
GGTACCTTCA AATCTGCTGT TGAACCCTAT ATGCGCGATG ATATGTCTGA TGCTGCAAAA
GAAGCTAACA GCGCACTGCT CGCCGATGTA TGGCAAAGTT ATACCCAAAC AGTTGCCAAC
AATCGCAATA TAGACGCCTC AGCCCTCGTT CTCGATGCAT CAACCTACTT AGCCGAGTTA
GATAAAGCCC AAGGCGACTC TGCGACGATG GCTATCAATA TGAAGTGGGT TGATTCACTC
GCCACTGCTG AAGATTTCCG CAAAACCATG CTCGATACGG TAGGCAAAGC GAAAAGTGGC
GATAGTTTTA AGCAAATCAG TTTTTATGAC TATTTAACCC TTGTCGCCCC TAAACCTAGC
TTTATTGAGC AAGATAGCGT TGGAATTATC GTTGCCAGTG GCACTATCCT CAATGGCAAG
CAACCTGCTG GACAAATTGG TGGCGATAGC ACGGCAGAAT TGTTACGTAA AGCCCGCTTT
GATAAACACA TTAAGGCCTT AGTGCTTAGA GTGGATAGCC CTGGCGGAAG TGCTTTCGCA
TCAGAGCAAA TTCGCCAAGA ACTACTCGCC TTAAAAGCGG CGGGTAAACC TGTGGTTGTC
AGTATGGGAA GCCTTGCTGC ATCCGGCGGC TATTGGATTT CGGCCAGTGC AGATTATATT
TTTGCAACGC CCACTACACT TACAGGCTCA ATCGGTATTT TTGGTATGAT CACCACTTTT
GAAGATTCCC TTGATAGCAT AGGAATACAT ACGGATGGCG TATCCACATC TGAATGGGCT
GGTTTATCGG TGACTCGTAC CCTTTCATCA TCGGTTGAAG CGGTTATCCA GCGCCATATT
GAGCGAGGTT ATCTCAATTT TATTTCCCTC GTTGCCAAAG AGCGTAACAT GACCTTAGAA
CAGGTCGATA GCATCGCCCA AGGGCGGGTG TGGAGCGGTA AAAAAGCCCT TGAGTTAGGT
TTAGTCGATG AGCTAGGCGA CATCGATGAA GCTATCGCCA AAGCCGCAAA ATTAGCCAAT
TTGAATCTAT TTGATACCCG TGTGATTGAA CAGGAATTAA CCCCTGAACA ACTCTTTATT
CAGCAAATGT TTGCTTCAGT ATCGAGTTAT TTACCGGCAT CACTTAGCCA TTCTTCTGTG
CTTGAGCAAA TGCTACAACA ATGGACTGGT AGCCTAAAGA CGATTACCTC TTTCAATGAT
CCTAATCATG TTTATATTTA CTGTGACAAC TGTGAGTTAC TCAATTAA
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| Protein sequence | MSANPSFFKR ICLFIWNILN GTRKLILNLI FFGILAVIMI SITAGEDIQV EDNSALVLNL
AGSIVDQKQQ IDPIEAALKQ GNKANADGEI LLADVLYVID NAAQDTRITT LVLDLADLKR
AGISKLQSIG NAINRFKESG KQVVAIGNYY EQNQYFLASF ADTIYLNPQG GISLDGLSMY
NLYFKSALEK LKIKAHIFRV GTFKSAVEPY MRDDMSDAAK EANSALLADV WQSYTQTVAN
NRNIDASALV LDASTYLAEL DKAQGDSATM AINMKWVDSL ATAEDFRKTM LDTVGKAKSG
DSFKQISFYD YLTLVAPKPS FIEQDSVGII VASGTILNGK QPAGQIGGDS TAELLRKARF
DKHIKALVLR VDSPGGSAFA SEQIRQELLA LKAAGKPVVV SMGSLAASGG YWISASADYI
FATPTTLTGS IGIFGMITTF EDSLDSIGIH TDGVSTSEWA GLSVTRTLSS SVEAVIQRHI
ERGYLNFISL VAKERNMTLE QVDSIAQGRV WSGKKALELG LVDELGDIDE AIAKAAKLAN
LNLFDTRVIE QELTPEQLFI QQMFASVSSY LPASLSHSSV LEQMLQQWTG SLKTITSFND
PNHVYIYCDN CELLN
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