Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1791 |
Symbol | fadE |
ID | 5079252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2034992 |
End bp | 2037439 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498942 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001183315 |
Protein GI | 146292891 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000904865 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTACCC TACTTTGGAT CATCGCTATG ATCTTAGTGT TAGGAGCCCT AGCTTACCTT CGGGTATCTT TGCTCACTGC CACTATCGCA GCCGCTGTTG TGATGACAGC AGGATGGACA CTCGATGTTG TCGGCCCTAT CTCTTGGATC GTTTTCCTTG TGATTGCCTT GCCACTTAAC ATCAGTGCAT TTAGACAAAA TGTAATCAGT CGCCCACTGA TGAAGATATA TCGTGGCATC ATGCCTGAAA TGTCTTCTAC CGAAAAAGAA GCGATTGAAG CCGGCACCAC TTGGTGGGAA GCCGATCTGT TTTCAGGTAA CCCGAACTGG AAAAAACTCC ATAACTACCC AGTTGCGCGT TTAAGTGCAG ATGAGCAAGC CTTCCTCGAT GGCCCAGTAG AAGAAGTGTG CCGCATGGTA AACCAACACC AGGTATCACA CCAACTCGCT GACTTACCTG CAGAAGTATG GCAATACCTC AAAGATCATG GCTTCTTTGC TATGATCATC AAGAAAAAAT ACGGCGGTTT AGAGTATTCA GCCTATGCAC AATCCCGTGT GTTGCAAAAA CTAGCAGGCG TCAGCAGTGA GTTAGCTTCA ACTGTTGGTG TACCGAACTC TTTAGGCCCT GGTGAACTAT TGCAACATTA CGGCACGCCA GAGCAACAAA ACCATTATTT ACCGCGTTTA GCCAAAGGGT TAGAAGTCCC TTGTTTCGCT CTGACCAGCC CAGAAGCCGG TAGCGATGCA GGCTCGATTC CTGATTTTGG TATCGTGTGT AAAGGTCAAT GGGAAGGCGA AGAAGTTCTG GGGATGAAGT TAACCTGGAA CAAACGCTAT ATCACCTTAG CACCGGTTGC CACTGTATTA GGTTTAGCCT TCAAACTGCG CGATCCTGAT CATCTACTTG GTGATAAAGA AGAGCTCGGC ATTACCTGCG CACTGATCCC AACCGATGTT GAAGGTGTTG AAACGGGTCG TCGTCACTTC CCGCTCAACT GTATGTTCCA AAACGGTCCG ACTCGCGGCA ACGAAGTATT CGTGCCATTA AGCTTCATCA TTGGCGGCCC GAAAATGGCT GGTCAAGGCT GGCGCATGCT GGTGGAATGT TTATCAGTGG GTCGTGGTAT CACGCTGCCA TCAAACTCAG CGGGTGGCGT GAAAACCGCA GCACTGGCAA CGGGTGCCTA TGCGCGCATT CGTCGTCAAT TCAAACTGCC CATTGGTAAG TTAGAAGGCA TTGAAGAGCC AATGGCTCGC ATCGGTGGCA ACGCCTACCT AATGGATGCG GTCACTTCGC TAACAACGAC AGGTATTGAT TTAGGAGAAA AACCATCGGT TATCTCTGCA ATAGTGAAAT ACCACTTAAC CGATAGAATG CAGAAATGCA TCATCGATGC CATGGACATT CATGGCGGTA AAGGCGTATG TCTTGGCCCG AATAACTATT TAGGCCGTGG TTACCAAGCT GCGCCTATCG CGATTACTGT TGAAGGTGCA AACATCCTCA CCCGTTCGAT GATCATCTAC GGCCAAGGCG CGATCCGTTG CCATCCGTAC GTGCTTGCCG AAATGGAATC CGCGTTTGAT ACCCAGTCGG GTCAAGGTTT AGCCAATTTC GATGCGGCAA TTTTCGGTCA TATTGGTTTT GCGACCAGTA ATTTTGTTCG TAGCTTCTGG TTAGGTCTGA CATCGAGCCG TTTCTCAAAC GCGCCTTACT CAGATAAAAC CAAGCGTTAT TATCAACATA TGAATCGTTT CAGTGCCAAC CTTGCCCTAC TCTCTGACTT AGCCATGGCA ACGTTGGGTG GTAACCTTAA ACGTAAAGAA CGTATCTCTG CCCGTTTAGG TGACTTATTA AGTCAACTGT ATCTGGCATC AGCCACACTG AAACGCTATG AAGATGAAGG CCGTCAAACC GACGACTTGC CATTAGTACA ATGGGCCGTT GAAGATGCAC TATACAAGCT ACAAGCATCT TTAGACGATT TACTGGATAA CTTCCCTATG GGTCTTGGCG GCGTATTACG TGTGGTGATG TTCCCATTCG GTCGTCCACT GAAACGCCCA AGCGATGTGT TAGATCATAA AGTCGCTAAG ATCATGCAAA CACCCTGTGA AAGTCGTGAC CGTTTAGGTA AAGGCCAGTT CTGGACTAAC TCGGAGCACA ATGCTGTAGG TATTCAAGAG CAAACGCTTA AGGATATTCT GGCTGCCGAA CCTTTATTTG ACAAAGTCTG TAAAGCCAGT GGTAAACGTC TACCCTTTAT GTGGTTAGAT AAAGTGGCCG CTGAAGGCAA AGCCTTAGGG GTATTGAGCG ATAGCGAAAT ACAACTGTTG GAAAGAGCCG AGATTGGCCG CATGAAGTCA ATCAATGTGG ATGACTTTGA CCCAGCAGAA CTGCGTCCAG AAGTAGTTTC TGCTACTTCA CAAGAGCGCG CAGCCTAA
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Protein sequence | MTTLLWIIAM ILVLGALAYL RVSLLTATIA AAVVMTAGWT LDVVGPISWI VFLVIALPLN ISAFRQNVIS RPLMKIYRGI MPEMSSTEKE AIEAGTTWWE ADLFSGNPNW KKLHNYPVAR LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPAEVWQYL KDHGFFAMII KKKYGGLEYS AYAQSRVLQK LAGVSSELAS TVGVPNSLGP GELLQHYGTP EQQNHYLPRL AKGLEVPCFA LTSPEAGSDA GSIPDFGIVC KGQWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPD HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGPKMA GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR IGGNAYLMDA VTSLTTTGID LGEKPSVISA IVKYHLTDRM QKCIIDAMDI HGGKGVCLGP NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TQSGQGLANF DAAIFGHIGF ATSNFVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA TLGGNLKRKE RISARLGDLL SQLYLASATL KRYEDEGRQT DDLPLVQWAV EDALYKLQAS LDDLLDNFPM GLGGVLRVVM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN SEHNAVGIQE QTLKDILAAE PLFDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDSEIQLL ERAEIGRMKS INVDDFDPAE LRPEVVSATS QERAA
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