Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1703 |
Symbol | |
ID | 5079361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1941317 |
End bp | 1942414 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498852 |
Product | NlpB/DapX family lipoprotein |
Protein accession | YP_001183227 |
Protein GI | 146292803 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000363681 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA AAGTCACCCC ACTGATCTTA GTCGCTGCCG TTGCGGCCTG TTCCTCACCA CTTGAACGTC GTCAAGCAAA CGGTGGCGAT GACTATGTTC AGGCTGAGCA AGCGCCAATG CTTAAAATCC CAGAGGGATT AAAGACGCCA CCTTACAATA AAGAATATGA AGTGCCAGCG TTAGGCGCTA AAGCGAATAC TGCGCTTATT GGTAAAACCC TTGATATTCG TCCACCATTG CAAGTACTGC CAATGGCTGA AGGTACCCAT GTTGAAGAGG GTAGCGATAA TATCAAAATC GTGGTTGAGT CTATCGACAA TTCAGCAGAC CTAAAGCAAG AGATCTTTGC TAACTTAGAT GGTTTCTTAG CAAAGCAAGC GATCCCTGTT CGTAGCCGTG ATTTTGATAA GAGCAATATC GAAACCGACT GGATCGAAAG CCGTGAAGTG ATTGAATCGA GCCTGTGGGG GGCGGATAAA GTCTATCTGT TACGCCAACG CTATCGTTTC GATGTGGAAA CCCGTCCACA TGGCCGTACG GCAAGTATCG TTATTCACTT AGTTGAACAT GAAGAGTTTT ACGACGATAA AGCCCAAGAA GTGTTATTAA GTGGTGAAGA TAAACAAAGA TACACCATTG ATATGCTTAA CAGCGCTATC GCTTATATGA GCGTTAAACG TGAGCAAGCA ATCCAAGCCA ATCGCTTAAA GCAAACATTA GGGATCAATG TTGATCTCGT GACACCAGAG GCGGGAGCCG CCTATTGGTC AGCTAAAGCA CCTTATAAGC AAGTGTGGGA TCGTTTGCGT ATCGTACTCC CTGAAATGGG GTTTGAAATT GCCGATATGG ATAGTACGAA AGGATTGTAC TTCATCAAGT TTACGGATAA TTCGGGTTTC TGGAGTTCGC TCTGGAGCAG TAACAAGGTA TCGCTAAAAG AGGGCAGTTA TCGTTTACTG CTGGAAGATG GTGATACACC TGAAGAGACC AAATTATTCC TACGTGATGG TGATGACCAA CCATTAGCGA ATGATGTTGT GTCTAATATC AACCAATCAT TGACAGATTT GATGAGAGAA GAACGTAAGC TACGCTAA
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Protein sequence | MLKKVTPLIL VAAVAACSSP LERRQANGGD DYVQAEQAPM LKIPEGLKTP PYNKEYEVPA LGAKANTALI GKTLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNSAD LKQEIFANLD GFLAKQAIPV RSRDFDKSNI ETDWIESREV IESSLWGADK VYLLRQRYRF DVETRPHGRT ASIVIHLVEH EEFYDDKAQE VLLSGEDKQR YTIDMLNSAI AYMSVKREQA IQANRLKQTL GINVDLVTPE AGAAYWSAKA PYKQVWDRLR IVLPEMGFEI ADMDSTKGLY FIKFTDNSGF WSSLWSSNKV SLKEGSYRLL LEDGDTPEET KLFLRDGDDQ PLANDVVSNI NQSLTDLMRE ERKLR
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