Gene Sputcn32_1640 details

Gene Information

• Locus tag: Sputcn32_1640
• Symbol: uvrC
• ID: 5079384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1869851
• End bp: 1871680
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640498785
• Product: excinuclease ABC subunit C
• Protein accession: YP_001183164
• Protein GI: 146292740
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00105988
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAGTG TTTTTAACGC CCAAAGTTTT TTACGCACGG TTTCATCTTC TGCCGGGGTT 
TATCGCATGT ATGACGTCAA GGGTGACGTC ATCTATGTGG GAAAAGCCAA GGATCTTAAA 
AAACGGCTTT CGTCGTATTT TCGTAAAAAT TTAGACAATG TTAAGACTCA AGCCTTAGTC 
TCGCATATTC ACCATATTGA TGTGACACTG ACCCACAGTG AAACCGATGC CTTGTTGCTT 
GAAAATGATT ACATCAAGCA ATACATGCCT AAATACAATG TGTTGTTGCG TGATGATAAA 
TCTTATCCTT ACATTTTATT AAGCCAACAC GAACACCCAA GGCTTGCCTA TCACCGTGGC 
CCCCAGCGTG AAAAAGGCCA TTATTTTGGC CCTTACCCCA ATGGCGGCGC GGTACGTGAA 
AGCCTGCATT TAATGCAGAA ACTCTTTCCT ATTCGTCAAT GTGACGACCT TTATTACAAA 
TCCCGTTCAC GGCCCTGTTT GCAGTATCAG CTTTCCCGCT GCAGTGCGCC TTGCGTGGGA 
AAAGTCAGCA ATGCCGACTA CGACGAACAA GTGAAACTTG CTAGCTTATT TTTAAAAGGC 
AAAGATCAGC AAGTGATCAG TACGTTAGTA GCTAAGATGG AGCAGGCGGC GCAGCAGCAG 
GAATATGAAC AGGCGGCACG CTTTCGTGAT CAAATTATGG CGCTGCGTAA GGTCGCTGAG 
CAGCAGGAAG TATCGAACAA TAAAGGCGAT ATGGATGTGA TTGGTGTGCA CTATGCGTCG 
GGTATCGCCT GTTTCCATTT GTTATTTATC CGCGAGGGTA AAATCTTTGG TAGTCGCAGT 
TATTATCCTT CTGTACCGGC CCAGACGGAT ATGGATGAAG TGCTGCGATC CTTTATTCTG 
CAGTTTTACT TAAATGCCGA TATACAGCGC ACTATTCCAA AGGAAGTGGT CATCAGCCAC 
AACTTTGAAG AGTTGCACGA GCTGGAAGCC GCGGTATCCA TTGCACTGAA TAAAAAGTTT 
TCGATAAAGA CCAATGTGCG TGCCGATAGG GCCAGTTTTT TACGCTTGGC TGTGACCAAT 
GCCACCAATG CTGTCATCAC GCGTTTATCC CATAAGAACA CGGTCGAGCA GCGTTTTGTA 
TTATTAGAAG AAATTTTAGA ATTGAGTACA CCTATACACC GTATGGAATG TTTTGATATC 
AGCCATACTA TGGGAGAAAG TTCCGTTGCC TCCTGTGTGG TATTTAACCG TGAAGGGCCA 
CATAAAGGAG AATATCGTCG CTATAATATC GAAGGCATTA CGCCTGGTGA TGATTATGCT 
GCGATGAAAC AAGCCATCAC TCGCCGTTTT GATAAGATTG AAGCAGGCGG TAAAATCCCT 
GATATTCTGT TTATCGATGG TGGCTTAGGG CAATTACGCA TTGCTCAGAA AATTGTAGAT 
GAAAAATTTG TCCATCTCGA TAAAGCGCCG CAATTGATTG GAGTGGCTAA AGGGGAGGGG 
CGTAAGCCGG GGCTAGAAAC ATTAATTTTA GGGGATACAG AAACGAGTTT TTCCCTTGAA 
GGTGATTCAC CTGCATTACA TCTGATTCAG CATATTCGTG ATGAATCCCA TCGATTTGCG 
ATTACAGGAC ATCGCAATCG TCGTCAGAAA ACGCGCAATA CCTCGACGTT GGAATCTATT 
CCTGGTATTG GTCCTAAACG TCGTAAAGCA CTCTTACAGC ATCTTGGTGG GTTACAGGAG 
GTGAAGGGGG CGAGTGTAGC CGAATTAGTT AAAGTGCCTG GGATCAGTAT AGAAATGGCA 
CAAACCATTC ATGATGCATT GCGAGGGTGA 

 

Protein sequence

MSSVFNAQSF LRTVSSSAGV YRMYDVKGDV IYVGKAKDLK KRLSSYFRKN LDNVKTQALV 
SHIHHIDVTL THSETDALLL ENDYIKQYMP KYNVLLRDDK SYPYILLSQH EHPRLAYHRG 
PQREKGHYFG PYPNGGAVRE SLHLMQKLFP IRQCDDLYYK SRSRPCLQYQ LSRCSAPCVG 
KVSNADYDEQ VKLASLFLKG KDQQVISTLV AKMEQAAQQQ EYEQAARFRD QIMALRKVAE 
QQEVSNNKGD MDVIGVHYAS GIACFHLLFI REGKIFGSRS YYPSVPAQTD MDEVLRSFIL 
QFYLNADIQR TIPKEVVISH NFEELHELEA AVSIALNKKF SIKTNVRADR ASFLRLAVTN 
ATNAVITRLS HKNTVEQRFV LLEEILELST PIHRMECFDI SHTMGESSVA SCVVFNREGP 
HKGEYRRYNI EGITPGDDYA AMKQAITRRF DKIEAGGKIP DILFIDGGLG QLRIAQKIVD 
EKFVHLDKAP QLIGVAKGEG RKPGLETLIL GDTETSFSLE GDSPALHLIQ HIRDESHRFA 
ITGHRNRRQK TRNTSTLESI PGIGPKRRKA LLQHLGGLQE VKGASVAELV KVPGISIEMA 
QTIHDALRG