| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1171 |
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| Symbol | rplS |
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| ID | 5081581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1311906 |
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| End bp | 1312259 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498302 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_001182698 |
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| Protein GI | 146292274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000251517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAACA TCATTAAAAT GCTCAACGAT GAGCAAATGA AACAAGACGT TCCTGCGTTT
GGTGCTGGTG ATACAGTAGT CGTTCAGGTT CGTGTTAAAG AAGGTGACAA AGAGCGTTTA
CAGGCTTTCG AAGGCGTTGT AATTGCTAAA CGTAACCGTG GTCTGCACTC TGCATTCACA
GTACGTAAAA TCTCTAATGG TGAAGGTGTT GAGCGTGCAT TCCAAACGCA CAGCCCTCTG
ATCGCAAGCA TTGAAGTTAA GCGTCGTGGC CGCGTTCGTC GCGCCAAACT GTACTACTTA
CGTGATCGTT CAGGTAAATC TGCACGTATC CGTGAGAAAT TGGCAACTAA ATAA
|
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| Protein sequence | MNNIIKMLND EQMKQDVPAF GAGDTVVVQV RVKEGDKERL QAFEGVVIAK RNRGLHSAFT
VRKISNGEGV ERAFQTHSPL IASIEVKRRG RVRRAKLYYL RDRSGKSARI REKLATK
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